Hb_006483_010

Information

Type -
Description -
Location Contig6483: 30640-33341
Sequence    

Annotation

kegg
ID rcu:RCOM_1409840
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative (EC:2.7.10.2)
nr
ID XP_002523608.1
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
swissprot
ID Q3EDL4
description Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2
trembl
ID B9SC89
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1, putative OS=Ricinus communis GN=RCOM_1409840 PE=3 SV=1
Gene Ontology
ID GO:0004674
description probable serine threonine-protein kinase at1g01540

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_52436: 30798-31295 , PASA_asmbl_52437: 31503-32797 , PASA_asmbl_52438: 32840-33257
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006483_010 0.0 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
2 Hb_000749_110 0.1546581035 - - PREDICTED: choline transporter-like protein 2 [Jatropha curcas]
3 Hb_000366_190 0.1585303534 - - Phosphoenolpyruvate carboxylase, putative [Ricinus communis]
4 Hb_015026_060 0.1676768547 - - PREDICTED: uncharacterized protein LOC105649473 [Jatropha curcas]
5 Hb_050686_010 0.1681293658 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000261_520 0.1755048158 - - PREDICTED: uncharacterized protein LOC105633192 [Jatropha curcas]
7 Hb_005271_080 0.1776551625 - - receptor kinase, putative [Ricinus communis]
8 Hb_000027_030 0.1778647136 - - Uncharacterized protein isoform 1 [Theobroma cacao]
9 Hb_000755_080 0.1804930173 - - hypothetical protein RCOM_1016710 [Ricinus communis]
10 Hb_020805_010 0.1829757864 - - protein with unknown function [Ricinus communis]
11 Hb_002431_020 0.1833600337 - - PREDICTED: F-box protein SKP2A [Jatropha curcas]
12 Hb_000613_100 0.1836331083 - - PREDICTED: long chain acyl-CoA synthetase 8 [Jatropha curcas]
13 Hb_141132_010 0.1848513252 - - Hsc70-interacting protein, putative [Ricinus communis]
14 Hb_000212_320 0.1865474165 - - PREDICTED: uncharacterized protein LOC105644891 [Jatropha curcas]
15 Hb_001279_330 0.1867711302 - - Protein bem46, putative [Ricinus communis]
16 Hb_008103_040 0.1921397925 - - diacylglycerol O-acyltransferase 1 [Jatropha curcas]
17 Hb_005928_080 0.1930588837 - - PREDICTED: probable galacturonosyltransferase 6 isoform X1 [Jatropha curcas]
18 Hb_002687_040 0.1933598402 - - PREDICTED: alpha-galactosidase 1-like [Jatropha curcas]
19 Hb_002044_050 0.1942137854 - - -
20 Hb_000375_030 0.1954823872 - - -

Gene co-expression network

sample Hb_006483_010 Hb_006483_010 Hb_000749_110 Hb_000749_110 Hb_006483_010--Hb_000749_110 Hb_000366_190 Hb_000366_190 Hb_006483_010--Hb_000366_190 Hb_015026_060 Hb_015026_060 Hb_006483_010--Hb_015026_060 Hb_050686_010 Hb_050686_010 Hb_006483_010--Hb_050686_010 Hb_000261_520 Hb_000261_520 Hb_006483_010--Hb_000261_520 Hb_005271_080 Hb_005271_080 Hb_006483_010--Hb_005271_080 Hb_000037_110 Hb_000037_110 Hb_000749_110--Hb_000037_110 Hb_000749_110--Hb_000366_190 Hb_000755_080 Hb_000755_080 Hb_000749_110--Hb_000755_080 Hb_000749_110--Hb_000261_520 Hb_002044_050 Hb_002044_050 Hb_000749_110--Hb_002044_050 Hb_009119_030 Hb_009119_030 Hb_000366_190--Hb_009119_030 Hb_020805_010 Hb_020805_010 Hb_000366_190--Hb_020805_010 Hb_000062_030 Hb_000062_030 Hb_000366_190--Hb_000062_030 Hb_009485_020 Hb_009485_020 Hb_000366_190--Hb_009485_020 Hb_002320_070 Hb_002320_070 Hb_000366_190--Hb_002320_070 Hb_083043_010 Hb_083043_010 Hb_015026_060--Hb_083043_010 Hb_000424_230 Hb_000424_230 Hb_015026_060--Hb_000424_230 Hb_001279_330 Hb_001279_330 Hb_015026_060--Hb_001279_330 Hb_000613_100 Hb_000613_100 Hb_015026_060--Hb_000613_100 Hb_005368_010 Hb_005368_010 Hb_015026_060--Hb_005368_010 Hb_001040_120 Hb_001040_120 Hb_015026_060--Hb_001040_120 Hb_114984_010 Hb_114984_010 Hb_050686_010--Hb_114984_010 Hb_050686_010--Hb_000366_190 Hb_000040_050 Hb_000040_050 Hb_050686_010--Hb_000040_050 Hb_120662_010 Hb_120662_010 Hb_050686_010--Hb_120662_010 Hb_000329_420 Hb_000329_420 Hb_050686_010--Hb_000329_420 Hb_000261_520--Hb_000755_080 Hb_000375_030 Hb_000375_030 Hb_000261_520--Hb_000375_030 Hb_091384_010 Hb_091384_010 Hb_000261_520--Hb_091384_010 Hb_000640_220 Hb_000640_220 Hb_000261_520--Hb_000640_220 Hb_005895_040 Hb_005895_040 Hb_000261_520--Hb_005895_040 Hb_004376_030 Hb_004376_030 Hb_000261_520--Hb_004376_030 Hb_005271_080--Hb_001279_330 Hb_005271_080--Hb_005368_010 Hb_005271_080--Hb_000424_230 Hb_001689_020 Hb_001689_020 Hb_005271_080--Hb_001689_020 Hb_000197_210 Hb_000197_210 Hb_005271_080--Hb_000197_210 Hb_005271_080--Hb_000261_520
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
10.4432 3.82768 2.56865 14.19 27.9579 11.2287
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.49211 2.24771 4.65663 6.12136 1.34287

CAGE analysis