Hb_028621_030

Information

Type -
Description -
Location Contig28621: 22197-25000
Sequence    

Annotation

kegg
ID rcu:RCOM_0988670
description serine/threonine protein kinase, putative (EC:2.7.11.1)
nr
ID XP_012070178.1
description PREDICTED: serine/threonine-protein kinase AGC1-7 [Jatropha curcas]
swissprot
ID Q1PFB9
description Serine/threonine-protein kinase AGC1-7 OS=Arabidopsis thaliana GN=AGC1-7 PE=1 SV=1
trembl
ID A0A067L5R0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04245 PE=4 SV=1
Gene Ontology
ID GO:0004674
description serine threonine-protein kinase d6pk-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_028621_030 0.0 - - PREDICTED: serine/threonine-protein kinase AGC1-7 [Jatropha curcas]
2 Hb_000009_370 0.0146748029 - - hypothetical protein JCGZ_12284 [Jatropha curcas]
3 Hb_000429_210 0.2383519872 transcription factor TF Family: ERF hypothetical protein RCOM_0089590 [Ricinus communis]
4 Hb_011316_070 0.2490284391 - - acyltransferase, putative [Ricinus communis]
5 Hb_003750_100 0.2490961504 - - HMGI/Y family protein [Populus trichocarpa]
6 Hb_180924_010 0.2626910088 - - CPI-4 [Morus alba var. atropurpurea]
7 Hb_008453_120 0.2799409409 transcription factor TF Family: bZIP hypothetical protein POPTR_0005s26480g [Populus trichocarpa]
8 Hb_023558_010 0.2801077631 - - PREDICTED: subtilisin-like protease SBT1.7 [Jatropha curcas]
9 Hb_000522_070 0.2837835064 - - PREDICTED: uncharacterized protein LOC105632109 [Jatropha curcas]
10 Hb_010916_010 0.2852027414 - - terpene synthase [Populus trichocarpa]
11 Hb_003638_060 0.2884708404 transcription factor TF Family: Orphans PREDICTED: zinc finger protein CONSTANS-like [Jatropha curcas]
12 Hb_007594_050 0.2898504629 - - ATP binding protein, putative [Ricinus communis]
13 Hb_087793_010 0.2950417997 - - conserved hypothetical protein [Ricinus communis]
14 Hb_002979_030 0.2953076763 - - PREDICTED: serine/threonine-protein kinase Aurora-1 isoform X2 [Jatropha curcas]
15 Hb_032011_020 0.2969381741 - - alpha-farnesene synthase [Ricinus communis]
16 Hb_000139_160 0.2974300724 - - conserved hypothetical protein [Ricinus communis]
17 Hb_001171_020 0.2974496951 - - PREDICTED: gibberellin 3-beta-dioxygenase 3-like [Citrus sinensis]
18 Hb_000514_010 0.2974736942 - - PREDICTED: probable indole-3-pyruvate monooxygenase YUCCA4 [Jatropha curcas]
19 Hb_001372_010 0.2974754007 - - ankyrin repeat-containing protein, putative [Ricinus communis]
20 Hb_004598_010 0.2974798643 - - PREDICTED: 11-beta-hydroxysteroid dehydrogenase-like 5 [Jatropha curcas]

Gene co-expression network

sample Hb_028621_030 Hb_028621_030 Hb_000009_370 Hb_000009_370 Hb_028621_030--Hb_000009_370 Hb_000429_210 Hb_000429_210 Hb_028621_030--Hb_000429_210 Hb_011316_070 Hb_011316_070 Hb_028621_030--Hb_011316_070 Hb_003750_100 Hb_003750_100 Hb_028621_030--Hb_003750_100 Hb_180924_010 Hb_180924_010 Hb_028621_030--Hb_180924_010 Hb_008453_120 Hb_008453_120 Hb_028621_030--Hb_008453_120 Hb_000009_370--Hb_000429_210 Hb_000009_370--Hb_011316_070 Hb_000009_370--Hb_003750_100 Hb_000009_370--Hb_180924_010 Hb_000009_370--Hb_008453_120 Hb_007416_380 Hb_007416_380 Hb_000429_210--Hb_007416_380 Hb_171646_010 Hb_171646_010 Hb_000429_210--Hb_171646_010 Hb_000069_390 Hb_000069_390 Hb_000429_210--Hb_000069_390 Hb_000574_520 Hb_000574_520 Hb_000429_210--Hb_000574_520 Hb_000429_210--Hb_003750_100 Hb_010916_010 Hb_010916_010 Hb_000429_210--Hb_010916_010 Hb_011316_070--Hb_010916_010 Hb_001709_100 Hb_001709_100 Hb_011316_070--Hb_001709_100 Hb_001722_090 Hb_001722_090 Hb_011316_070--Hb_001722_090 Hb_011316_070--Hb_008453_120 Hb_002049_040 Hb_002049_040 Hb_003750_100--Hb_002049_040 Hb_006953_010 Hb_006953_010 Hb_003750_100--Hb_006953_010 Hb_182291_010 Hb_182291_010 Hb_003750_100--Hb_182291_010 Hb_004598_010 Hb_004598_010 Hb_003750_100--Hb_004598_010 Hb_001372_010 Hb_001372_010 Hb_003750_100--Hb_001372_010 Hb_107495_020 Hb_107495_020 Hb_003750_100--Hb_107495_020 Hb_002986_040 Hb_002986_040 Hb_180924_010--Hb_002986_040 Hb_001199_120 Hb_001199_120 Hb_180924_010--Hb_001199_120 Hb_008453_040 Hb_008453_040 Hb_180924_010--Hb_008453_040 Hb_022958_020 Hb_022958_020 Hb_180924_010--Hb_022958_020 Hb_136620_010 Hb_136620_010 Hb_008453_120--Hb_136620_010 Hb_000206_080 Hb_000206_080 Hb_008453_120--Hb_000206_080 Hb_001433_120 Hb_001433_120 Hb_008453_120--Hb_001433_120 Hb_007218_010 Hb_007218_010 Hb_008453_120--Hb_007218_010 Hb_003411_080 Hb_003411_080 Hb_008453_120--Hb_003411_080 Hb_008453_120--Hb_010916_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.115428 0.0182831 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0266303 0 0 0 0

CAGE analysis