Hb_008453_120

Information

Type transcription factor
Description TF Family: bZIP
Location Contig8453: 85722-86918
Sequence    

Annotation

kegg
ID pop:POPTR_0005s26480g
description POPTRDRAFT_818828; hypothetical protein
nr
ID XP_002307742.2
description hypothetical protein POPTR_0005s26480g [Populus trichocarpa]
swissprot
ID Q84JK2
description Protein FD OS=Arabidopsis thaliana GN=FD PE=1 SV=1
trembl
ID B9H516
description Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s26480g PE=4 SV=2
Gene Ontology
ID GO:0003700
description basic-leucine zipper transcription factor family

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008453_120 0.0 transcription factor TF Family: bZIP hypothetical protein POPTR_0005s26480g [Populus trichocarpa]
2 Hb_136620_010 0.1297039792 - - PREDICTED: mechanosensitive ion channel protein 10-like [Jatropha curcas]
3 Hb_000206_080 0.134376251 transcription factor TF Family: MYB PREDICTED: myb-related protein Myb4-like [Jatropha curcas]
4 Hb_001433_120 0.1463682973 - - hypothetical protein CICLE_v10003574mg, partial [Citrus clementina]
5 Hb_007218_010 0.1496036949 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g05700 isoform X1 [Populus euphratica]
6 Hb_003411_080 0.154817178 - - conserved hypothetical protein [Ricinus communis]
7 Hb_010916_010 0.1571186089 - - terpene synthase [Populus trichocarpa]
8 Hb_002028_230 0.1678349169 - - Pectinesterase-3 precursor, putative [Ricinus communis]
9 Hb_005854_060 0.1695239233 - - short-chain dehydrogenase, putative [Ricinus communis]
10 Hb_000069_250 0.1704662024 - - hypothetical protein JCGZ_14250 [Jatropha curcas]
11 Hb_000165_270 0.1715255393 transcription factor TF Family: Tify JAZ10 [Hevea brasiliensis]
12 Hb_001680_060 0.1797444568 - - conserved hypothetical protein [Ricinus communis]
13 Hb_007157_050 0.1825199174 - - hypothetical protein RCOM_0711500 [Ricinus communis]
14 Hb_000129_060 0.1851996744 - - PREDICTED: fatty acyl-CoA reductase 2-like isoform X1 [Populus euphratica]
15 Hb_162008_030 0.1854406498 - - cytochrome p450 [Ageratina adenophora]
16 Hb_004019_130 0.1854576252 transcription factor TF Family: LOB PREDICTED: LOB domain-containing protein 6 [Jatropha curcas]
17 Hb_021622_010 0.1877461216 - - hypothetical protein POPTR_0002s06160g [Populus trichocarpa]
18 Hb_149407_010 0.1884094637 - - PREDICTED: uncharacterized protein LOC105643999 [Jatropha curcas]
19 Hb_029879_040 0.1884619014 - - PREDICTED: cytochrome P450 77A4-like [Jatropha curcas]
20 Hb_010578_020 0.1885893917 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_008453_120 Hb_008453_120 Hb_136620_010 Hb_136620_010 Hb_008453_120--Hb_136620_010 Hb_000206_080 Hb_000206_080 Hb_008453_120--Hb_000206_080 Hb_001433_120 Hb_001433_120 Hb_008453_120--Hb_001433_120 Hb_007218_010 Hb_007218_010 Hb_008453_120--Hb_007218_010 Hb_003411_080 Hb_003411_080 Hb_008453_120--Hb_003411_080 Hb_010916_010 Hb_010916_010 Hb_008453_120--Hb_010916_010 Hb_136620_010--Hb_000206_080 Hb_136620_010--Hb_003411_080 Hb_002028_230 Hb_002028_230 Hb_136620_010--Hb_002028_230 Hb_005854_060 Hb_005854_060 Hb_136620_010--Hb_005854_060 Hb_136620_010--Hb_001433_120 Hb_149407_010 Hb_149407_010 Hb_136620_010--Hb_149407_010 Hb_000206_080--Hb_003411_080 Hb_000206_080--Hb_002028_230 Hb_000206_080--Hb_149407_010 Hb_162008_030 Hb_162008_030 Hb_000206_080--Hb_162008_030 Hb_000206_080--Hb_005854_060 Hb_000165_270 Hb_000165_270 Hb_001433_120--Hb_000165_270 Hb_001433_120--Hb_007218_010 Hb_001433_120--Hb_005854_060 Hb_007157_050 Hb_007157_050 Hb_001433_120--Hb_007157_050 Hb_001680_060 Hb_001680_060 Hb_001433_120--Hb_001680_060 Hb_002447_060 Hb_002447_060 Hb_001433_120--Hb_002447_060 Hb_007218_010--Hb_005854_060 Hb_162008_040 Hb_162008_040 Hb_007218_010--Hb_162008_040 Hb_007218_010--Hb_007157_050 Hb_121680_010 Hb_121680_010 Hb_007218_010--Hb_121680_010 Hb_001546_100 Hb_001546_100 Hb_007218_010--Hb_001546_100 Hb_002030_140 Hb_002030_140 Hb_007218_010--Hb_002030_140 Hb_003411_080--Hb_002028_230 Hb_003411_080--Hb_149407_010 Hb_003411_080--Hb_162008_030 Hb_000129_060 Hb_000129_060 Hb_003411_080--Hb_000129_060 Hb_029879_040 Hb_029879_040 Hb_003411_080--Hb_029879_040 Hb_003147_020 Hb_003147_020 Hb_010916_010--Hb_003147_020 Hb_010916_010--Hb_149407_010 Hb_010916_010--Hb_162008_030 Hb_010916_010--Hb_007218_010 Hb_010916_010--Hb_029879_040 Hb_010916_010--Hb_000129_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.070555 1.76161 0.0668556 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0604661 0 0 0 0

CAGE analysis