Hb_007850_100

Information

Type -
Description -
Location Contig7850: 106039-107323
Sequence    

Annotation

kegg
ID rcu:RCOM_1468070
description hypothetical protein
nr
ID XP_012080422.1
description PREDICTED: uncharacterized protein LOC105640661 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KGJ0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11756 PE=4 SV=1
Gene Ontology
ID GO:0006950
description adenine nucleotide alpha hydrolases-like superfamily

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007850_100 0.0 - - PREDICTED: uncharacterized protein LOC105640661 [Jatropha curcas]
2 Hb_012691_010 0.1314412011 - - hypothetical protein POPTR_0005s18750g [Populus trichocarpa]
3 Hb_001898_100 0.1374408581 - - PREDICTED: phosphatidylserine decarboxylase proenzyme 2-like [Jatropha curcas]
4 Hb_007643_060 0.1393459778 - - -
5 Hb_006266_010 0.1485119573 - - unnamed protein product [Vitis vinifera]
6 Hb_001266_130 0.1508702668 - - PREDICTED: soluble inorganic pyrophosphatase-like [Jatropha curcas]
7 Hb_006789_030 0.1520742812 - - PREDICTED: wall-associated receptor kinase-like 22 [Prunus mume]
8 Hb_002025_290 0.1526442429 transcription factor TF Family: G2-like conserved hypothetical protein [Ricinus communis]
9 Hb_000020_020 0.1530256548 - - hypothetical protein JCGZ_06491 [Jatropha curcas]
10 Hb_001544_060 0.154201428 transcription factor TF Family: MYB PREDICTED: transcription repressor MYB4 isoform X2 [Jatropha curcas]
11 Hb_006615_220 0.1544075127 transcription factor TF Family: bHLH PREDICTED: transcription factor BIM1 isoform X2 [Jatropha curcas]
12 Hb_005834_050 0.1629688229 - - PREDICTED: cationic amino acid transporter 1-like [Jatropha curcas]
13 Hb_007120_130 0.1638340037 - - conserved hypothetical protein [Ricinus communis]
14 Hb_028707_120 0.1649200448 - - PREDICTED: uncharacterized protein LOC105645799 isoform X2 [Jatropha curcas]
15 Hb_000471_030 0.1681459662 - - -
16 Hb_001579_190 0.1686538836 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000035_150 0.1695924639 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 40 [Jatropha curcas]
18 Hb_010407_150 0.1698296718 transcription factor TF Family: MYB hypothetical protein POPTR_0008s16660g [Populus trichocarpa]
19 Hb_000445_310 0.17315424 - - hypothetical protein B456_011G218000 [Gossypium raimondii]
20 Hb_005743_010 0.1739177602 - - RING/U-box superfamily protein, putative [Theobroma cacao]

Gene co-expression network

sample Hb_007850_100 Hb_007850_100 Hb_012691_010 Hb_012691_010 Hb_007850_100--Hb_012691_010 Hb_001898_100 Hb_001898_100 Hb_007850_100--Hb_001898_100 Hb_007643_060 Hb_007643_060 Hb_007850_100--Hb_007643_060 Hb_006266_010 Hb_006266_010 Hb_007850_100--Hb_006266_010 Hb_001266_130 Hb_001266_130 Hb_007850_100--Hb_001266_130 Hb_006789_030 Hb_006789_030 Hb_007850_100--Hb_006789_030 Hb_006294_030 Hb_006294_030 Hb_012691_010--Hb_006294_030 Hb_000471_030 Hb_000471_030 Hb_012691_010--Hb_000471_030 Hb_012691_010--Hb_007643_060 Hb_005834_050 Hb_005834_050 Hb_012691_010--Hb_005834_050 Hb_007951_020 Hb_007951_020 Hb_012691_010--Hb_007951_020 Hb_005743_010 Hb_005743_010 Hb_012691_010--Hb_005743_010 Hb_000212_270 Hb_000212_270 Hb_001898_100--Hb_000212_270 Hb_001544_060 Hb_001544_060 Hb_001898_100--Hb_001544_060 Hb_003337_020 Hb_003337_020 Hb_001898_100--Hb_003337_020 Hb_001898_100--Hb_006789_030 Hb_000175_200 Hb_000175_200 Hb_001898_100--Hb_000175_200 Hb_001898_100--Hb_001266_130 Hb_000035_150 Hb_000035_150 Hb_007643_060--Hb_000035_150 Hb_006615_220 Hb_006615_220 Hb_007643_060--Hb_006615_220 Hb_007643_060--Hb_007951_020 Hb_007643_060--Hb_005743_010 Hb_000343_010 Hb_000343_010 Hb_007643_060--Hb_000343_010 Hb_003592_060 Hb_003592_060 Hb_006266_010--Hb_003592_060 Hb_006266_010--Hb_005743_010 Hb_009693_010 Hb_009693_010 Hb_006266_010--Hb_009693_010 Hb_006266_010--Hb_006615_220 Hb_137272_010 Hb_137272_010 Hb_006266_010--Hb_137272_010 Hb_068804_070 Hb_068804_070 Hb_006266_010--Hb_068804_070 Hb_000020_020 Hb_000020_020 Hb_001266_130--Hb_000020_020 Hb_008878_020 Hb_008878_020 Hb_001266_130--Hb_008878_020 Hb_001266_130--Hb_000212_270 Hb_000062_050 Hb_000062_050 Hb_001266_130--Hb_000062_050 Hb_001501_020 Hb_001501_020 Hb_001266_130--Hb_001501_020 Hb_000046_430 Hb_000046_430 Hb_001266_130--Hb_000046_430 Hb_031685_010 Hb_031685_010 Hb_006789_030--Hb_031685_010 Hb_010407_150 Hb_010407_150 Hb_006789_030--Hb_010407_150 Hb_029095_010 Hb_029095_010 Hb_006789_030--Hb_029095_010 Hb_006789_030--Hb_001544_060 Hb_034585_070 Hb_034585_070 Hb_006789_030--Hb_034585_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.557762 2.87558 0.380462 0.0337368 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0830516 0 0 0.771001 1.03057

CAGE analysis