Hb_007113_080

Information

Type -
Description -
Location Contig7113: 65402-66067
Sequence    

Annotation

kegg
ID vvi:104880929
description uncharacterized LOC104880929
nr
ID XP_012079021.1
description PREDICTED: uncharacterized protein LOC105639553 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K6C8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12222 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_55302: 65683-66304
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007113_080 0.0 - - PREDICTED: uncharacterized protein LOC105639553 isoform X1 [Jatropha curcas]
2 Hb_001114_170 0.1622320138 - - conserved hypothetical protein [Ricinus communis]
3 Hb_089140_090 0.1782520169 - - PREDICTED: ankyrin repeat-containing protein At3g12360-like isoform X3 [Beta vulgaris subsp. vulgaris]
4 Hb_002218_100 0.1997592154 - - PREDICTED: uncharacterized protein At2g34160 [Jatropha curcas]
5 Hb_000120_350 0.2076985195 - - PREDICTED: uncharacterized protein LOC104422872 isoform X1 [Eucalyptus grandis]
6 Hb_005690_030 0.2095672102 - - hypothetical protein VITISV_020378 [Vitis vinifera]
7 Hb_004449_040 0.2135427426 - - PREDICTED: uncharacterized protein C630.12 [Jatropha curcas]
8 Hb_000563_440 0.2165472714 - - PREDICTED: condensin-2 complex subunit H2 isoform X2 [Jatropha curcas]
9 Hb_001123_110 0.2230284359 - - conserved hypothetical protein [Ricinus communis]
10 Hb_001751_060 0.2232736676 - - PREDICTED: SEC12-like protein 1 [Jatropha curcas]
11 Hb_119583_020 0.2243477449 - - PREDICTED: uncharacterized protein LOC105628090 [Jatropha curcas]
12 Hb_000224_080 0.2265556931 - - hypothetical protein RCOM_0510880 [Ricinus communis]
13 Hb_084230_010 0.2269478613 - - PREDICTED: plant intracellular Ras-group-related LRR protein 6 isoform X4 [Jatropha curcas]
14 Hb_002045_090 0.2295853887 - - PREDICTED: tryptophan synthase alpha chain-like [Jatropha curcas]
15 Hb_002175_020 0.2340318841 - - PREDICTED: uncharacterized protein LOC105642125 isoform X2 [Jatropha curcas]
16 Hb_033594_040 0.2401597583 - - PREDICTED: heptahelical transmembrane protein 4-like isoform X2 [Jatropha curcas]
17 Hb_000800_020 0.2439121878 - - PREDICTED: 3-phosphoinositide-dependent protein kinase 2 [Jatropha curcas]
18 Hb_000300_710 0.2445754623 - - PREDICTED: uncharacterized protein LOC105123549 [Populus euphratica]
19 Hb_010488_040 0.2446686368 - - PREDICTED: phosphomannomutase [Populus euphratica]
20 Hb_002027_440 0.2453838967 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_007113_080 Hb_007113_080 Hb_001114_170 Hb_001114_170 Hb_007113_080--Hb_001114_170 Hb_089140_090 Hb_089140_090 Hb_007113_080--Hb_089140_090 Hb_002218_100 Hb_002218_100 Hb_007113_080--Hb_002218_100 Hb_000120_350 Hb_000120_350 Hb_007113_080--Hb_000120_350 Hb_005690_030 Hb_005690_030 Hb_007113_080--Hb_005690_030 Hb_004449_040 Hb_004449_040 Hb_007113_080--Hb_004449_040 Hb_001114_170--Hb_089140_090 Hb_000757_130 Hb_000757_130 Hb_001114_170--Hb_000757_130 Hb_015807_160 Hb_015807_160 Hb_001114_170--Hb_015807_160 Hb_002027_440 Hb_002027_440 Hb_001114_170--Hb_002027_440 Hb_001863_070 Hb_001863_070 Hb_001114_170--Hb_001863_070 Hb_101146_010 Hb_101146_010 Hb_001114_170--Hb_101146_010 Hb_033594_040 Hb_033594_040 Hb_089140_090--Hb_033594_040 Hb_089140_090--Hb_002027_440 Hb_000563_440 Hb_000563_440 Hb_089140_090--Hb_000563_440 Hb_089140_090--Hb_015807_160 Hb_002045_190 Hb_002045_190 Hb_089140_090--Hb_002045_190 Hb_176472_020 Hb_176472_020 Hb_002218_100--Hb_176472_020 Hb_002218_100--Hb_000563_440 Hb_000123_140 Hb_000123_140 Hb_002218_100--Hb_000123_140 Hb_002218_100--Hb_000120_350 Hb_000959_190 Hb_000959_190 Hb_002218_100--Hb_000959_190 Hb_004125_060 Hb_004125_060 Hb_002218_100--Hb_004125_060 Hb_000120_350--Hb_000959_190 Hb_001123_110 Hb_001123_110 Hb_000120_350--Hb_001123_110 Hb_002151_010 Hb_002151_010 Hb_000120_350--Hb_002151_010 Hb_000120_350--Hb_000123_140 Hb_006935_040 Hb_006935_040 Hb_000120_350--Hb_006935_040 Hb_000300_710 Hb_000300_710 Hb_000120_350--Hb_000300_710 Hb_002045_090 Hb_002045_090 Hb_005690_030--Hb_002045_090 Hb_000123_370 Hb_000123_370 Hb_005690_030--Hb_000123_370 Hb_086122_010 Hb_086122_010 Hb_005690_030--Hb_086122_010 Hb_001793_020 Hb_001793_020 Hb_005690_030--Hb_001793_020 Hb_000000_180 Hb_000000_180 Hb_005690_030--Hb_000000_180 Hb_006130_020 Hb_006130_020 Hb_005690_030--Hb_006130_020 Hb_000684_120 Hb_000684_120 Hb_004449_040--Hb_000684_120 Hb_004449_040--Hb_000563_440 Hb_004449_040--Hb_001114_170 Hb_005271_140 Hb_005271_140 Hb_004449_040--Hb_005271_140 Hb_004449_040--Hb_101146_010 Hb_002411_060 Hb_002411_060 Hb_004449_040--Hb_002411_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.284409 0.317506 1.84906 0.819334 0.0352175 0.152903
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0867702 0.682076 0 0.055631 0.40211

CAGE analysis