Hb_006495_080

Information

Type -
Description -
Location Contig6495: 95109-96335
Sequence    

Annotation

kegg
ID pper:PRUPE_ppb025438mg
description hypothetical protein
nr
ID XP_007213278.1
description hypothetical protein PRUPE_ppb025438mg, partial [Prunus persica]
swissprot
ID -
description -
trembl
ID M5WL16
description Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppb025438mg PE=4 SV=1
Gene Ontology
ID GO:0005488
description kinesin-4 -like protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006495_080 0.0 - - hypothetical protein PRUPE_ppb025438mg, partial [Prunus persica]
2 Hb_002929_130 0.2725299262 - - phosphofructokinase [Hevea brasiliensis]
3 Hb_096346_010 0.2737597692 - - unnamed protein product [Coffea canephora]
4 Hb_001983_010 0.2751572833 - - -
5 Hb_000397_120 0.2798012117 - - PREDICTED: uncharacterized protein LOC105641234 [Jatropha curcas]
6 Hb_024272_010 0.280860178 - - PREDICTED: uncharacterized protein LOC104213140 [Nicotiana sylvestris]
7 Hb_010317_030 0.2876814492 - - unknown [Picea sitchensis]
8 Hb_046440_010 0.2894170339 - - hypothetical protein JCGZ_06190 [Jatropha curcas]
9 Hb_078897_010 0.2929418169 - - hypothetical protein POPTR_0012s044902g, partial [Populus trichocarpa]
10 Hb_029921_020 0.2967183533 - - PREDICTED: putative transferase CAF17 homolog, mitochondrial [Jatropha curcas]
11 Hb_005723_040 0.2982473259 - - PREDICTED: hippocampus abundant transcript-like protein 1 isoform X1 [Jatropha curcas]
12 Hb_001450_100 0.3098194186 - - serine/threonine-protein kinase bri1, putative [Ricinus communis]
13 Hb_000260_690 0.315244901 - - disease resistance protein (CC-NBS-LRR class) family protein [Medicago truncatula]
14 Hb_001369_380 0.317593514 - - F-box family protein, putative [Theobroma cacao]
15 Hb_001366_120 0.318412212 - - unknown [Zea mays]
16 Hb_100964_010 0.3206716706 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
17 Hb_000571_010 0.3213833474 - - PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Gossypium raimondii]
18 Hb_071869_010 0.3257907298 - - PREDICTED: uncharacterized protein LOC105628378 isoform X2 [Jatropha curcas]
19 Hb_012725_100 0.3263303438 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000544_160 0.3307694444 - - PREDICTED: phosphomethylethanolamine N-methyltransferase-like [Nelumbo nucifera]

Gene co-expression network

sample Hb_006495_080 Hb_006495_080 Hb_002929_130 Hb_002929_130 Hb_006495_080--Hb_002929_130 Hb_096346_010 Hb_096346_010 Hb_006495_080--Hb_096346_010 Hb_001983_010 Hb_001983_010 Hb_006495_080--Hb_001983_010 Hb_000397_120 Hb_000397_120 Hb_006495_080--Hb_000397_120 Hb_024272_010 Hb_024272_010 Hb_006495_080--Hb_024272_010 Hb_010317_030 Hb_010317_030 Hb_006495_080--Hb_010317_030 Hb_100964_010 Hb_100964_010 Hb_002929_130--Hb_100964_010 Hb_029921_020 Hb_029921_020 Hb_002929_130--Hb_029921_020 Hb_000256_210 Hb_000256_210 Hb_002929_130--Hb_000256_210 Hb_089140_060 Hb_089140_060 Hb_002929_130--Hb_089140_060 Hb_007603_020 Hb_007603_020 Hb_002929_130--Hb_007603_020 Hb_026206_020 Hb_026206_020 Hb_002929_130--Hb_026206_020 Hb_021420_010 Hb_021420_010 Hb_096346_010--Hb_021420_010 Hb_014324_020 Hb_014324_020 Hb_096346_010--Hb_014324_020 Hb_005976_050 Hb_005976_050 Hb_096346_010--Hb_005976_050 Hb_001366_120 Hb_001366_120 Hb_096346_010--Hb_001366_120 Hb_001606_080 Hb_001606_080 Hb_096346_010--Hb_001606_080 Hb_000099_210 Hb_000099_210 Hb_096346_010--Hb_000099_210 Hb_001450_100 Hb_001450_100 Hb_001983_010--Hb_001450_100 Hb_012725_100 Hb_012725_100 Hb_001983_010--Hb_012725_100 Hb_001983_010--Hb_010317_030 Hb_011645_030 Hb_011645_030 Hb_001983_010--Hb_011645_030 Hb_001983_010--Hb_024272_010 Hb_077211_010 Hb_077211_010 Hb_001983_010--Hb_077211_010 Hb_007810_100 Hb_007810_100 Hb_000397_120--Hb_007810_100 Hb_013399_080 Hb_013399_080 Hb_000397_120--Hb_013399_080 Hb_000069_710 Hb_000069_710 Hb_000397_120--Hb_000069_710 Hb_003376_050 Hb_003376_050 Hb_000397_120--Hb_003376_050 Hb_000189_510 Hb_000189_510 Hb_000397_120--Hb_000189_510 Hb_000022_200 Hb_000022_200 Hb_000397_120--Hb_000022_200 Hb_024272_010--Hb_010317_030 Hb_007827_020 Hb_007827_020 Hb_024272_010--Hb_007827_020 Hb_024272_010--Hb_007810_100 Hb_071869_010 Hb_071869_010 Hb_024272_010--Hb_071869_010 Hb_024272_010--Hb_012725_100 Hb_003106_010 Hb_003106_010 Hb_024272_010--Hb_003106_010 Hb_010317_030--Hb_007827_020 Hb_007603_010 Hb_007603_010 Hb_010317_030--Hb_007603_010 Hb_010317_030--Hb_071869_010 Hb_005656_060 Hb_005656_060 Hb_010317_030--Hb_005656_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0960544 0 0.072041 0.0421728 0.0225126 0.129798
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0793467 0.0174447 0

CAGE analysis