Hb_014324_020

Information

Type -
Description -
Location Contig14324: 5525-6438
Sequence    

Annotation

kegg
ID pop:POPTR_0011s11670g
description POPTRDRAFT_806008; hypothetical protein
nr
ID XP_012065122.1
description PREDICTED: Werner Syndrome-like exonuclease [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L6N6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05559 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_014324_020 0.0 - - PREDICTED: Werner Syndrome-like exonuclease [Jatropha curcas]
2 Hb_005846_020 0.2107790216 - - PREDICTED: tubulin-folding cofactor C [Jatropha curcas]
3 Hb_005803_010 0.2253111301 - - PREDICTED: probable zinc metallopeptidase EGY3, chloroplastic isoform X1 [Jatropha curcas]
4 Hb_002157_190 0.2267767355 - - PREDICTED: mRNA turnover protein 4 homolog [Jatropha curcas]
5 Hb_096346_010 0.2291039871 - - unnamed protein product [Coffea canephora]
6 Hb_000976_080 0.2378549695 - - hypothetical protein VITISV_034376 [Vitis vinifera]
7 Hb_001001_020 0.2429410392 - - PREDICTED: 26S proteasome non-ATPase regulatory subunit 14 homolog [Populus euphratica]
8 Hb_005322_030 0.2430285689 - - PREDICTED: rRNA-processing protein UTP23 homolog [Jatropha curcas]
9 Hb_152453_010 0.2432041946 - - PREDICTED: putative transferase CAF17 homolog, mitochondrial [Jatropha curcas]
10 Hb_006831_100 0.2443099102 - - snRNA-activating protein complex subunit, putative [Ricinus communis]
11 Hb_000193_150 0.245360686 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 100 [Jatropha curcas]
12 Hb_021420_010 0.2485377462 - - hypothetical protein CICLE_v10029508mg [Citrus clementina]
13 Hb_000256_210 0.251892021 - - PREDICTED: 40S ribosomal protein S11-like [Phoenix dactylifera]
14 Hb_022132_010 0.2538154271 - - unknown [Medicago truncatula]
15 Hb_000465_120 0.254327474 - - PREDICTED: uncharacterized protein LOC105632294 [Jatropha curcas]
16 Hb_035318_010 0.2558451268 - - PREDICTED: uncharacterized protein LOC105645250 [Jatropha curcas]
17 Hb_002831_040 0.2567346339 - - PREDICTED: fatty acid amide hydrolase-like [Jatropha curcas]
18 Hb_000072_140 0.2574375456 - - -
19 Hb_007765_060 0.2592392634 - - Proliferating cell nuclear antigen [Theobroma cacao]
20 Hb_000617_220 0.2593889186 - - PREDICTED: 60S ribosomal protein L7-2-like [Jatropha curcas]

Gene co-expression network

sample Hb_014324_020 Hb_014324_020 Hb_005846_020 Hb_005846_020 Hb_014324_020--Hb_005846_020 Hb_005803_010 Hb_005803_010 Hb_014324_020--Hb_005803_010 Hb_002157_190 Hb_002157_190 Hb_014324_020--Hb_002157_190 Hb_096346_010 Hb_096346_010 Hb_014324_020--Hb_096346_010 Hb_000976_080 Hb_000976_080 Hb_014324_020--Hb_000976_080 Hb_001001_020 Hb_001001_020 Hb_014324_020--Hb_001001_020 Hb_152453_010 Hb_152453_010 Hb_005846_020--Hb_152453_010 Hb_005846_020--Hb_000976_080 Hb_005846_020--Hb_005803_010 Hb_000617_220 Hb_000617_220 Hb_005846_020--Hb_000617_220 Hb_005695_060 Hb_005695_060 Hb_005846_020--Hb_005695_060 Hb_003091_010 Hb_003091_010 Hb_005846_020--Hb_003091_010 Hb_000345_530 Hb_000345_530 Hb_005803_010--Hb_000345_530 Hb_018790_070 Hb_018790_070 Hb_005803_010--Hb_018790_070 Hb_005803_010--Hb_000976_080 Hb_005803_010--Hb_152453_010 Hb_002249_160 Hb_002249_160 Hb_005803_010--Hb_002249_160 Hb_009411_020 Hb_009411_020 Hb_002157_190--Hb_009411_020 Hb_000175_390 Hb_000175_390 Hb_002157_190--Hb_000175_390 Hb_001616_090 Hb_001616_090 Hb_002157_190--Hb_001616_090 Hb_012132_040 Hb_012132_040 Hb_002157_190--Hb_012132_040 Hb_000156_140 Hb_000156_140 Hb_002157_190--Hb_000156_140 Hb_000088_200 Hb_000088_200 Hb_002157_190--Hb_000088_200 Hb_021420_010 Hb_021420_010 Hb_096346_010--Hb_021420_010 Hb_005976_050 Hb_005976_050 Hb_096346_010--Hb_005976_050 Hb_001366_120 Hb_001366_120 Hb_096346_010--Hb_001366_120 Hb_001606_080 Hb_001606_080 Hb_096346_010--Hb_001606_080 Hb_000099_210 Hb_000099_210 Hb_096346_010--Hb_000099_210 Hb_000976_080--Hb_152453_010 Hb_000976_080--Hb_001001_020 Hb_000976_080--Hb_000345_530 Hb_000976_080--Hb_005695_060 Hb_002783_120 Hb_002783_120 Hb_000976_080--Hb_002783_120 Hb_001001_020--Hb_005695_060 Hb_001160_120 Hb_001160_120 Hb_001001_020--Hb_001160_120 Hb_001001_020--Hb_002783_120 Hb_000453_190 Hb_000453_190 Hb_001001_020--Hb_000453_190 Hb_001001_020--Hb_018790_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.689905 0.0899592 0.336299 0.0644164 0.403042 0.554716
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.289689 0.16534 0.199766 0

CAGE analysis