Hb_006269_030

Information

Type transcription factor
Description TF Family: bHLH
Location Contig6269: 33414-37168
Sequence    

Annotation

kegg
ID rcu:RCOM_1014730
description DNA binding protein, putative
nr
ID XP_012074626.1
description PREDICTED: transcription factor bHLH30-like [Jatropha curcas]
swissprot
ID Q9S7Y1
description Transcription factor bHLH30 OS=Arabidopsis thaliana GN=BHLH30 PE=1 SV=1
trembl
ID A0A067KLJ6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10603 PE=4 SV=1
Gene Ontology
ID GO:0046983
description transcription factor bhlh30-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006269_030 0.0 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH30-like [Jatropha curcas]
2 Hb_170878_070 0.1679481231 - - hypothetical protein EUGRSUZ_L008133, partial [Eucalyptus grandis]
3 Hb_009486_120 0.1684933803 - - hypothetical protein PRUPE_ppa004149mg [Prunus persica]
4 Hb_134174_010 0.175306245 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
5 Hb_006681_030 0.1775639982 - - PREDICTED: serine/threonine-protein kinase HT1-like isoform X1 [Populus euphratica]
6 Hb_001226_100 0.1778700574 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
7 Hb_009296_060 0.1801739736 - - glutathione s-transferase, putative [Ricinus communis]
8 Hb_001689_070 0.1814014001 - - cytochrome P450, putative [Ricinus communis]
9 Hb_005614_030 0.1816873943 - - PREDICTED: transcription factor SCREAM2-like isoform X1 [Jatropha curcas]
10 Hb_004551_050 0.1819124964 - - PREDICTED: glucose-6-phosphate/phosphate translocator 2, chloroplastic [Jatropha curcas]
11 Hb_001439_040 0.186837142 - - PREDICTED: chorismate mutase 1, chloroplastic [Jatropha curcas]
12 Hb_123560_020 0.1876109289 - - hypothetical protein JCGZ_12464 [Jatropha curcas]
13 Hb_000215_130 0.1880108671 - - PREDICTED: probable pectinesterase 53 [Jatropha curcas]
14 Hb_001345_010 0.1904757436 - - hypothetical protein MIMGU_mgv1a010889mg [Erythranthe guttata]
15 Hb_000340_350 0.1905409436 - - PREDICTED: sugar transporter ERD6-like 7 isoform X1 [Jatropha curcas]
16 Hb_002304_190 0.1924732901 - - PREDICTED: 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase [Jatropha curcas]
17 Hb_002984_040 0.1934991912 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
18 Hb_000165_070 0.1937509098 - - hypothetical protein JCGZ_01211 [Jatropha curcas]
19 Hb_000473_070 0.1942916822 - - PREDICTED: amino-acid permease BAT1 homolog [Jatropha curcas]
20 Hb_001565_010 0.1956384849 - - hypothetical protein JCGZ_07371 [Jatropha curcas]

Gene co-expression network

sample Hb_006269_030 Hb_006269_030 Hb_170878_070 Hb_170878_070 Hb_006269_030--Hb_170878_070 Hb_009486_120 Hb_009486_120 Hb_006269_030--Hb_009486_120 Hb_134174_010 Hb_134174_010 Hb_006269_030--Hb_134174_010 Hb_006681_030 Hb_006681_030 Hb_006269_030--Hb_006681_030 Hb_001226_100 Hb_001226_100 Hb_006269_030--Hb_001226_100 Hb_009296_060 Hb_009296_060 Hb_006269_030--Hb_009296_060 Hb_001565_010 Hb_001565_010 Hb_170878_070--Hb_001565_010 Hb_094148_010 Hb_094148_010 Hb_170878_070--Hb_094148_010 Hb_004627_020 Hb_004627_020 Hb_170878_070--Hb_004627_020 Hb_001186_120 Hb_001186_120 Hb_170878_070--Hb_001186_120 Hb_000215_130 Hb_000215_130 Hb_170878_070--Hb_000215_130 Hb_001366_050 Hb_001366_050 Hb_170878_070--Hb_001366_050 Hb_123560_020 Hb_123560_020 Hb_009486_120--Hb_123560_020 Hb_002304_190 Hb_002304_190 Hb_009486_120--Hb_002304_190 Hb_000336_280 Hb_000336_280 Hb_009486_120--Hb_000336_280 Hb_022092_050 Hb_022092_050 Hb_009486_120--Hb_022092_050 Hb_001832_110 Hb_001832_110 Hb_009486_120--Hb_001832_110 Hb_002685_100 Hb_002685_100 Hb_009486_120--Hb_002685_100 Hb_001300_180 Hb_001300_180 Hb_134174_010--Hb_001300_180 Hb_002984_040 Hb_002984_040 Hb_134174_010--Hb_002984_040 Hb_003881_020 Hb_003881_020 Hb_134174_010--Hb_003881_020 Hb_000501_110 Hb_000501_110 Hb_134174_010--Hb_000501_110 Hb_001634_030 Hb_001634_030 Hb_134174_010--Hb_001634_030 Hb_137272_010 Hb_137272_010 Hb_134174_010--Hb_137272_010 Hb_005523_050 Hb_005523_050 Hb_006681_030--Hb_005523_050 Hb_006681_030--Hb_003881_020 Hb_000760_080 Hb_000760_080 Hb_006681_030--Hb_000760_080 Hb_003224_010 Hb_003224_010 Hb_006681_030--Hb_003224_010 Hb_006681_030--Hb_134174_010 Hb_007676_040 Hb_007676_040 Hb_006681_030--Hb_007676_040 Hb_001226_100--Hb_000336_280 Hb_001226_100--Hb_000215_130 Hb_001226_100--Hb_001186_120 Hb_001226_100--Hb_001832_110 Hb_001439_040 Hb_001439_040 Hb_001226_100--Hb_001439_040 Hb_005333_210 Hb_005333_210 Hb_001226_100--Hb_005333_210 Hb_000343_040 Hb_000343_040 Hb_009296_060--Hb_000343_040 Hb_000753_180 Hb_000753_180 Hb_009296_060--Hb_000753_180 Hb_009296_060--Hb_001439_040 Hb_000699_050 Hb_000699_050 Hb_009296_060--Hb_000699_050 Hb_009296_060--Hb_005333_210 Hb_011440_010 Hb_011440_010 Hb_009296_060--Hb_011440_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0141275 0.222572 0.863362 0.148396 0.0661559 0.0123912
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0321926 0.0253264 0 0.809042 0.370474

CAGE analysis