Hb_004129_120

Information

Type -
Description -
Location Contig4129: 92768-93390
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004129_120 0.0 - - -
2 Hb_000261_260 0.179688101 - - PREDICTED: LOW QUALITY PROTEIN: HBS1-like protein [Populus euphratica]
3 Hb_002471_150 0.1849002825 - - PREDICTED: 54S ribosomal protein L24, mitochondrial [Jatropha curcas]
4 Hb_007803_010 0.1931237205 - - PREDICTED: F-box protein At3g07870-like [Jatropha curcas]
5 Hb_007590_010 0.1949150052 - - ubiquitin-protein ligase, putative [Ricinus communis]
6 Hb_003073_200 0.1991751582 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410 [Jatropha curcas]
7 Hb_000009_590 0.2002807527 - - PREDICTED: prolyl endopeptidase-like isoform X1 [Jatropha curcas]
8 Hb_046049_010 0.2042203827 - - PREDICTED: far upstream element-binding protein 2 isoform X3 [Jatropha curcas]
9 Hb_000315_120 0.2052728036 - - -
10 Hb_012193_010 0.2055070634 - - nucleic acid binding protein, putative [Ricinus communis]
11 Hb_002289_100 0.20666589 - - PREDICTED: cytoplasmic tRNA 2-thiolation protein 2 [Jatropha curcas]
12 Hb_146868_010 0.2068403121 - - -
13 Hb_000008_330 0.2069051216 - - 60S ribosomal protein L12A [Hevea brasiliensis]
14 Hb_003376_320 0.2077897058 - - 60S ribosomal protein L12A [Hevea brasiliensis]
15 Hb_002505_040 0.2094430849 - - -
16 Hb_000529_020 0.2101030577 - - PREDICTED: 14-3-3-like protein GF14 kappa isoform X2 [Jatropha curcas]
17 Hb_012753_020 0.2116814676 - - conserved hypothetical protein [Ricinus communis]
18 Hb_029510_070 0.2119119796 - - Cytochrome c-type biogenesis protein cycL precursor, putative [Ricinus communis]
19 Hb_004800_070 0.2124200793 - - -
20 Hb_000530_010 0.2128860088 - - PREDICTED: uncharacterized WD repeat-containing protein C2A9.03 [Jatropha curcas]

Gene co-expression network

sample Hb_004129_120 Hb_004129_120 Hb_000261_260 Hb_000261_260 Hb_004129_120--Hb_000261_260 Hb_002471_150 Hb_002471_150 Hb_004129_120--Hb_002471_150 Hb_007803_010 Hb_007803_010 Hb_004129_120--Hb_007803_010 Hb_007590_010 Hb_007590_010 Hb_004129_120--Hb_007590_010 Hb_003073_200 Hb_003073_200 Hb_004129_120--Hb_003073_200 Hb_000009_590 Hb_000009_590 Hb_004129_120--Hb_000009_590 Hb_012799_130 Hb_012799_130 Hb_000261_260--Hb_012799_130 Hb_002067_040 Hb_002067_040 Hb_000261_260--Hb_002067_040 Hb_002289_100 Hb_002289_100 Hb_000261_260--Hb_002289_100 Hb_003159_080 Hb_003159_080 Hb_000261_260--Hb_003159_080 Hb_005608_020 Hb_005608_020 Hb_000261_260--Hb_005608_020 Hb_000748_080 Hb_000748_080 Hb_000261_260--Hb_000748_080 Hb_154826_010 Hb_154826_010 Hb_002471_150--Hb_154826_010 Hb_002375_090 Hb_002375_090 Hb_002471_150--Hb_002375_090 Hb_009793_010 Hb_009793_010 Hb_002471_150--Hb_009793_010 Hb_172632_090 Hb_172632_090 Hb_002471_150--Hb_172632_090 Hb_002043_130 Hb_002043_130 Hb_002471_150--Hb_002043_130 Hb_002226_070 Hb_002226_070 Hb_002471_150--Hb_002226_070 Hb_007747_060 Hb_007747_060 Hb_007803_010--Hb_007747_060 Hb_007803_010--Hb_003073_200 Hb_000421_070 Hb_000421_070 Hb_007803_010--Hb_000421_070 Hb_000008_330 Hb_000008_330 Hb_007803_010--Hb_000008_330 Hb_002081_130 Hb_002081_130 Hb_007803_010--Hb_002081_130 Hb_003464_110 Hb_003464_110 Hb_007803_010--Hb_003464_110 Hb_000099_240 Hb_000099_240 Hb_007590_010--Hb_000099_240 Hb_001358_030 Hb_001358_030 Hb_007590_010--Hb_001358_030 Hb_005333_070 Hb_005333_070 Hb_007590_010--Hb_005333_070 Hb_001226_160 Hb_001226_160 Hb_007590_010--Hb_001226_160 Hb_000923_020 Hb_000923_020 Hb_007590_010--Hb_000923_020 Hb_168000_010 Hb_168000_010 Hb_007590_010--Hb_168000_010 Hb_000645_150 Hb_000645_150 Hb_003073_200--Hb_000645_150 Hb_000002_330 Hb_000002_330 Hb_003073_200--Hb_000002_330 Hb_000236_370 Hb_000236_370 Hb_003073_200--Hb_000236_370 Hb_003073_200--Hb_000009_590 Hb_000421_120 Hb_000421_120 Hb_003073_200--Hb_000421_120 Hb_000041_220 Hb_000041_220 Hb_000009_590--Hb_000041_220 Hb_006816_320 Hb_006816_320 Hb_000009_590--Hb_006816_320 Hb_000236_300 Hb_000236_300 Hb_000009_590--Hb_000236_300 Hb_002505_040 Hb_002505_040 Hb_000009_590--Hb_002505_040 Hb_000398_190 Hb_000398_190 Hb_000009_590--Hb_000398_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.640401 0.835802 0.387569 0.718448 2.20359 1.60978
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.539405 2.11986 0.643475 1.51168 0

CAGE analysis