Hb_003106_180

Information

Type -
Description -
Location Contig3106: 134284-135075
Sequence    

Annotation

kegg
ID rcu:RCOM_1512240
description Peroxidase 65 precursor, putative (EC:1.11.1.7)
nr
ID XP_002511455.1
description Peroxidase 65 precursor, putative [Ricinus communis]
swissprot
ID O23609
description Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=3 SV=1
trembl
ID B9RB80
description Peroxidase OS=Ricinus communis GN=RCOM_1512240 PE=3 SV=1
Gene Ontology
ID GO:0005576
description peroxidase 41-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_32893: 134830-135111
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003106_180 0.0 - - Peroxidase 65 precursor, putative [Ricinus communis]
2 Hb_002324_050 0.124687988 - - hypothetical protein AMTR_s00420p00013340 [Amborella trichopoda]
3 Hb_003964_010 0.1390634536 transcription factor TF Family: WRKY hypothetical protein POPTR_0008s09360g [Populus trichocarpa]
4 Hb_004032_250 0.1511792209 - - conserved hypothetical protein [Ricinus communis]
5 Hb_002324_040 0.1527581766 - - PREDICTED: subtilisin-like protease SBT1.6 [Jatropha curcas]
6 Hb_000995_010 0.155373096 - - PREDICTED: uncharacterized protein LOC105635846 [Jatropha curcas]
7 Hb_001699_050 0.1592687715 transcription factor TF Family: MYB hypothetical protein POPTR_0005s11410g [Populus trichocarpa]
8 Hb_003656_170 0.1617208024 - - PREDICTED: phenylalanine ammonia-lyase-like [Jatropha curcas]
9 Hb_002235_370 0.1661480466 - - PREDICTED: probable calcium-binding protein CML45 [Jatropha curcas]
10 Hb_023386_050 0.1666114203 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000069_430 0.1709407383 - - PREDICTED: cyclic nucleotide-gated ion channel 1-like [Jatropha curcas]
12 Hb_002510_100 0.1725028998 - - Root phototropism protein, putative [Ricinus communis]
13 Hb_001071_060 0.1725523886 - - Trehalose phosphatase/synthase 5 isoform 1 [Theobroma cacao]
14 Hb_002078_250 0.1738775325 - - conserved hypothetical protein [Ricinus communis]
15 Hb_003025_150 0.1759814342 - - conserved hypothetical protein [Ricinus communis]
16 Hb_001776_100 0.176712631 - - PREDICTED: outer envelope pore protein 16, chloroplastic [Jatropha curcas]
17 Hb_006934_020 0.1784878228 - - hypothetical protein POPTR_0004s09051g [Populus trichocarpa]
18 Hb_006002_010 0.1793451445 transcription factor TF Family: MYB Myb domain protein 5 isoform 1 [Theobroma cacao]
19 Hb_012727_010 0.1813886637 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance RPP13-like protein 4 [Jatropha curcas]
20 Hb_001596_020 0.1825209566 - - hypothetical protein CICLE_v10014140mg [Citrus clementina]

Gene co-expression network

sample Hb_003106_180 Hb_003106_180 Hb_002324_050 Hb_002324_050 Hb_003106_180--Hb_002324_050 Hb_003964_010 Hb_003964_010 Hb_003106_180--Hb_003964_010 Hb_004032_250 Hb_004032_250 Hb_003106_180--Hb_004032_250 Hb_002324_040 Hb_002324_040 Hb_003106_180--Hb_002324_040 Hb_000995_010 Hb_000995_010 Hb_003106_180--Hb_000995_010 Hb_001699_050 Hb_001699_050 Hb_003106_180--Hb_001699_050 Hb_003656_170 Hb_003656_170 Hb_002324_050--Hb_003656_170 Hb_002324_050--Hb_002324_040 Hb_002324_050--Hb_004032_250 Hb_002324_050--Hb_003964_010 Hb_003025_150 Hb_003025_150 Hb_002324_050--Hb_003025_150 Hb_001123_170 Hb_001123_170 Hb_002324_050--Hb_001123_170 Hb_002078_250 Hb_002078_250 Hb_003964_010--Hb_002078_250 Hb_003964_010--Hb_003656_170 Hb_005649_010 Hb_005649_010 Hb_003964_010--Hb_005649_010 Hb_064985_010 Hb_064985_010 Hb_003964_010--Hb_064985_010 Hb_002343_020 Hb_002343_020 Hb_003964_010--Hb_002343_020 Hb_004032_250--Hb_001699_050 Hb_004032_250--Hb_002324_040 Hb_064047_010 Hb_064047_010 Hb_004032_250--Hb_064047_010 Hb_004282_040 Hb_004282_040 Hb_004032_250--Hb_004282_040 Hb_010381_110 Hb_010381_110 Hb_004032_250--Hb_010381_110 Hb_002324_040--Hb_003025_150 Hb_012727_010 Hb_012727_010 Hb_002324_040--Hb_012727_010 Hb_003579_040 Hb_003579_040 Hb_002324_040--Hb_003579_040 Hb_002324_040--Hb_064047_010 Hb_000808_160 Hb_000808_160 Hb_000995_010--Hb_000808_160 Hb_000995_010--Hb_001699_050 Hb_000061_100 Hb_000061_100 Hb_000995_010--Hb_000061_100 Hb_098160_010 Hb_098160_010 Hb_000995_010--Hb_098160_010 Hb_001405_060 Hb_001405_060 Hb_000995_010--Hb_001405_060 Hb_017604_020 Hb_017604_020 Hb_001699_050--Hb_017604_020 Hb_000007_160 Hb_000007_160 Hb_001699_050--Hb_000007_160 Hb_001699_050--Hb_000808_160 Hb_009510_050 Hb_009510_050 Hb_001699_050--Hb_009510_050 Hb_001699_050--Hb_002324_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0747023 0.684223 0.322739 0.548513 0.0278761 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0683938 0 0 0.348393 0.215684

CAGE analysis