Hb_002289_140

Information

Type -
Description -
Location Contig2289: 147049-147366
Sequence    

Annotation

kegg
ID rcu:RCOM_0750160
description hypothetical protein
nr
ID XP_002529614.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9SUE5
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0750160 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002289_140 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_000946_070 0.1853612222 - - chaperone protein DNAj, putative [Ricinus communis]
3 Hb_029510_120 0.1897436679 - - PREDICTED: protein PLANT CADMIUM RESISTANCE 8-like [Jatropha curcas]
4 Hb_000003_110 0.1911171633 - - Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis]
5 Hb_001616_100 0.1939592042 - - PREDICTED: cell division control protein 45 homolog [Jatropha curcas]
6 Hb_000015_190 0.2002791464 - - PREDICTED: uncharacterized protein LOC105647810 [Jatropha curcas]
7 Hb_000017_250 0.2031843821 - - PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Jatropha curcas]
8 Hb_048476_130 0.2034118211 - - scab resistance family protein [Populus trichocarpa]
9 Hb_005784_060 0.2049814347 - - PREDICTED: U-box domain-containing protein 28 [Jatropha curcas]
10 Hb_000563_140 0.2067291607 - - PREDICTED: probable polygalacturonase [Jatropha curcas]
11 Hb_000834_130 0.2085990763 - - conserved hypothetical protein [Ricinus communis]
12 Hb_002025_050 0.2092777831 - - conserved hypothetical protein [Ricinus communis]
13 Hb_002900_180 0.2126007114 transcription factor TF Family: LIM LIM1 [Hevea brasiliensis]
14 Hb_002304_100 0.2131941394 - - hypothetical protein JCGZ_21524 [Jatropha curcas]
15 Hb_000011_250 0.2141737212 - - PREDICTED: RING-H2 finger protein ATL3-like [Jatropha curcas]
16 Hb_000243_340 0.2145639892 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Jatropha curcas]
17 Hb_000568_020 0.2183578386 - - PREDICTED: probable aquaporin PIP2-5 [Jatropha curcas]
18 Hb_000997_240 0.2186735986 transcription factor TF Family: AUX/IAA Auxin-responsive protein IAA4, putative [Ricinus communis]
19 Hb_001195_210 0.2188822314 - - -
20 Hb_002233_160 0.2189786642 - - PREDICTED: uncharacterized protein LOC105633094 [Jatropha curcas]

Gene co-expression network

sample Hb_002289_140 Hb_002289_140 Hb_000946_070 Hb_000946_070 Hb_002289_140--Hb_000946_070 Hb_029510_120 Hb_029510_120 Hb_002289_140--Hb_029510_120 Hb_000003_110 Hb_000003_110 Hb_002289_140--Hb_000003_110 Hb_001616_100 Hb_001616_100 Hb_002289_140--Hb_001616_100 Hb_000015_190 Hb_000015_190 Hb_002289_140--Hb_000015_190 Hb_000017_250 Hb_000017_250 Hb_002289_140--Hb_000017_250 Hb_007416_290 Hb_007416_290 Hb_000946_070--Hb_007416_290 Hb_000057_100 Hb_000057_100 Hb_000946_070--Hb_000057_100 Hb_001677_090 Hb_001677_090 Hb_000946_070--Hb_001677_090 Hb_000946_070--Hb_029510_120 Hb_117639_010 Hb_117639_010 Hb_000946_070--Hb_117639_010 Hb_022250_160 Hb_022250_160 Hb_000946_070--Hb_022250_160 Hb_007659_050 Hb_007659_050 Hb_029510_120--Hb_007659_050 Hb_002370_050 Hb_002370_050 Hb_029510_120--Hb_002370_050 Hb_002233_160 Hb_002233_160 Hb_029510_120--Hb_002233_160 Hb_001688_030 Hb_001688_030 Hb_029510_120--Hb_001688_030 Hb_002809_080 Hb_002809_080 Hb_029510_120--Hb_002809_080 Hb_061222_010 Hb_061222_010 Hb_000003_110--Hb_061222_010 Hb_005784_060 Hb_005784_060 Hb_000003_110--Hb_005784_060 Hb_002900_180 Hb_002900_180 Hb_000003_110--Hb_002900_180 Hb_005253_020 Hb_005253_020 Hb_000003_110--Hb_005253_020 Hb_002292_080 Hb_002292_080 Hb_000003_110--Hb_002292_080 Hb_000003_110--Hb_001616_100 Hb_001616_100--Hb_000015_190 Hb_002304_100 Hb_002304_100 Hb_001616_100--Hb_002304_100 Hb_000157_020 Hb_000157_020 Hb_001616_100--Hb_000157_020 Hb_000243_340 Hb_000243_340 Hb_001616_100--Hb_000243_340 Hb_000805_270 Hb_000805_270 Hb_001616_100--Hb_000805_270 Hb_000561_040 Hb_000561_040 Hb_000015_190--Hb_000561_040 Hb_003001_050 Hb_003001_050 Hb_000015_190--Hb_003001_050 Hb_027400_020 Hb_027400_020 Hb_000015_190--Hb_027400_020 Hb_001777_010 Hb_001777_010 Hb_000015_190--Hb_001777_010 Hb_000419_140 Hb_000419_140 Hb_000015_190--Hb_000419_140 Hb_002701_030 Hb_002701_030 Hb_000017_250--Hb_002701_030 Hb_004705_060 Hb_004705_060 Hb_000017_250--Hb_004705_060 Hb_085829_010 Hb_085829_010 Hb_000017_250--Hb_085829_010 Hb_000853_250 Hb_000853_250 Hb_000017_250--Hb_000853_250 Hb_000162_190 Hb_000162_190 Hb_000017_250--Hb_000162_190 Hb_025787_020 Hb_025787_020 Hb_000017_250--Hb_025787_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.305219 0.924883 3.34333 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.510805 0 0.819567 0.407238

CAGE analysis