Hb_002092_030

Information

Type -
Description -
Location Contig2092: 12322-12519
Sequence    

Annotation

kegg
ID -
description -
nr
ID XP_012092996.1
description PREDICTED: uncharacterized protein LOC105650668 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JJF5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05879 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002092_030 0.0 - - PREDICTED: uncharacterized protein LOC105650668 [Jatropha curcas]
2 Hb_010377_020 0.1421928512 - - -
3 Hb_004631_030 0.2021663859 - - PREDICTED: putative clathrin assembly protein At4g40080 [Jatropha curcas]
4 Hb_002374_060 0.2048772199 - - amino acid transporter, putative [Ricinus communis]
5 Hb_000956_060 0.2071171699 transcription factor TF Family: bHLH conserved hypothetical protein [Ricinus communis]
6 Hb_010162_010 0.2103137306 - - PREDICTED: probable disease resistance protein At4g27220 [Jatropha curcas]
7 Hb_000297_220 0.2127882933 - - SAUR family protein [Theobroma cacao]
8 Hb_000975_130 0.2165851077 - - PREDICTED: uncharacterized protein LOC104445138 [Eucalyptus grandis]
9 Hb_002054_090 0.2185266255 - - PREDICTED: 36.4 kDa proline-rich protein-like [Gossypium raimondii]
10 Hb_012516_030 0.2187577262 - - PREDICTED: non-specific lipid-transfer protein 2 {ECO:0000303
11 Hb_001268_320 0.2208403457 - - PREDICTED: uncharacterized protein LOC104887816 [Beta vulgaris subsp. vulgaris]
12 Hb_000566_170 0.2229778485 transcription factor TF Family: MIKC PREDICTED: agamous-like MADS-box protein AGL9 homolog isoform X4 [Jatropha curcas]
13 Hb_003811_050 0.2238233484 - - hypothetical protein JCGZ_01310 [Jatropha curcas]
14 Hb_000510_210 0.2240804051 - - PREDICTED: phospholipase A1-Igamma1, chloroplastic-like [Jatropha curcas]
15 Hb_000676_170 0.2303828916 - - PREDICTED: bifunctional epoxide hydrolase 2 [Jatropha curcas]
16 Hb_000320_030 0.2325772171 - - PREDICTED: aspartic proteinase-like [Jatropha curcas]
17 Hb_131417_010 0.2355590291 - - hypothetical protein POPTR_0011s066602g, partial [Populus trichocarpa]
18 Hb_042491_010 0.2359324311 - - JHL06P13.14 [Jatropha curcas]
19 Hb_016120_020 0.2381647575 - - PREDICTED: tetrahydrocannabinolic acid synthase-like [Jatropha curcas]
20 Hb_110854_010 0.2383356541 - - -

Gene co-expression network

sample Hb_002092_030 Hb_002092_030 Hb_010377_020 Hb_010377_020 Hb_002092_030--Hb_010377_020 Hb_004631_030 Hb_004631_030 Hb_002092_030--Hb_004631_030 Hb_002374_060 Hb_002374_060 Hb_002092_030--Hb_002374_060 Hb_000956_060 Hb_000956_060 Hb_002092_030--Hb_000956_060 Hb_010162_010 Hb_010162_010 Hb_002092_030--Hb_010162_010 Hb_000297_220 Hb_000297_220 Hb_002092_030--Hb_000297_220 Hb_001268_320 Hb_001268_320 Hb_010377_020--Hb_001268_320 Hb_000110_390 Hb_000110_390 Hb_010377_020--Hb_000110_390 Hb_001242_010 Hb_001242_010 Hb_010377_020--Hb_001242_010 Hb_001894_180 Hb_001894_180 Hb_010377_020--Hb_001894_180 Hb_001329_030 Hb_001329_030 Hb_010377_020--Hb_001329_030 Hb_004631_030--Hb_000297_220 Hb_012516_030 Hb_012516_030 Hb_004631_030--Hb_012516_030 Hb_000566_170 Hb_000566_170 Hb_004631_030--Hb_000566_170 Hb_004631_030--Hb_000956_060 Hb_000510_210 Hb_000510_210 Hb_004631_030--Hb_000510_210 Hb_002054_090 Hb_002054_090 Hb_004631_030--Hb_002054_090 Hb_000676_170 Hb_000676_170 Hb_002374_060--Hb_000676_170 Hb_002374_060--Hb_010162_010 Hb_001006_030 Hb_001006_030 Hb_002374_060--Hb_001006_030 Hb_000069_520 Hb_000069_520 Hb_002374_060--Hb_000069_520 Hb_016120_020 Hb_016120_020 Hb_002374_060--Hb_016120_020 Hb_000856_250 Hb_000856_250 Hb_002374_060--Hb_000856_250 Hb_000975_130 Hb_000975_130 Hb_000956_060--Hb_000975_130 Hb_000956_060--Hb_000297_220 Hb_000956_060--Hb_012516_030 Hb_003811_050 Hb_003811_050 Hb_000956_060--Hb_003811_050 Hb_000676_130 Hb_000676_130 Hb_000956_060--Hb_000676_130 Hb_156696_010 Hb_156696_010 Hb_010162_010--Hb_156696_010 Hb_002461_070 Hb_002461_070 Hb_010162_010--Hb_002461_070 Hb_003371_040 Hb_003371_040 Hb_010162_010--Hb_003371_040 Hb_006314_020 Hb_006314_020 Hb_010162_010--Hb_006314_020 Hb_010162_010--Hb_001006_030 Hb_000297_220--Hb_012516_030 Hb_041063_010 Hb_041063_010 Hb_000297_220--Hb_041063_010 Hb_000297_220--Hb_002054_090 Hb_000306_050 Hb_000306_050 Hb_000297_220--Hb_000306_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 3.69231 2.54363 18.4192 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 2.67728 8.02551 0

CAGE analysis