Hb_001863_020

Information

Type -
Description -
Location Contig1863: 14753-24007
Sequence    

Annotation

kegg
ID rcu:RCOM_1037490
description hypothetical protein
nr
ID XP_012082455.1
description PREDICTED: protein FAM91A1 isoform X1 [Jatropha curcas]
swissprot
ID Q3UVG3
description Protein FAM91A1 OS=Mus musculus GN=Fam91a1 PE=2 SV=1
trembl
ID A0A067KBJ2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16573 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001863_020 0.0 - - PREDICTED: protein FAM91A1 isoform X1 [Jatropha curcas]
2 Hb_001138_060 0.1096333284 - - hypothetical protein CICLE_v10028086mg [Citrus clementina]
3 Hb_001946_380 0.1173779627 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 34-like [Jatropha curcas]
4 Hb_001399_010 0.12072848 - - ATP binding protein, putative [Ricinus communis]
5 Hb_000525_050 0.1323852999 - - conserved hypothetical protein [Ricinus communis]
6 Hb_042202_060 0.1363893814 - - PREDICTED: probable glycosyltransferase At5g03795 [Jatropha curcas]
7 Hb_005167_020 0.1401736899 - - PREDICTED: uncharacterized protein LOC104878039 [Vitis vinifera]
8 Hb_001723_060 0.144933881 rubber biosynthesis Gene Name: Dihydrolipoamide dehydrogenase PREDICTED: LOW QUALITY PROTEIN: dihydrolipoyl dehydrogenase 2, mitochondrial [Populus euphratica]
9 Hb_003453_050 0.1464075801 - - PREDICTED: calcium-binding mitochondrial carrier protein SCaMC-3-like [Jatropha curcas]
10 Hb_002876_270 0.1478691348 - - PREDICTED: probable magnesium transporter NIPA4 isoform X1 [Jatropha curcas]
11 Hb_002762_110 0.1501939871 - - conserved hypothetical protein [Ricinus communis]
12 Hb_121089_040 0.1504291164 - - PREDICTED: GDSL esterase/lipase At4g10955 [Jatropha curcas]
13 Hb_012244_010 0.1507782404 - - PREDICTED: uncharacterized protein LOC105641034 [Jatropha curcas]
14 Hb_000622_290 0.1514297113 - - PREDICTED: F-box/kelch-repeat protein At3g61590 [Jatropha curcas]
15 Hb_003875_030 0.1518067744 - - PREDICTED: probable plastidic glucose transporter 1 [Jatropha curcas]
16 Hb_000388_060 0.1526227068 - - fructokinase [Manihot esculenta]
17 Hb_000167_110 0.1534714522 - - glycerol-3-phosphate dehydrogenase, putative [Ricinus communis]
18 Hb_000120_640 0.1538395249 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
19 Hb_000866_050 0.1538982403 - - phosphate transporter [Manihot esculenta]
20 Hb_140459_010 0.1539389781 - - thioredoxin f-type, putative [Ricinus communis]

Gene co-expression network

sample Hb_001863_020 Hb_001863_020 Hb_001138_060 Hb_001138_060 Hb_001863_020--Hb_001138_060 Hb_001946_380 Hb_001946_380 Hb_001863_020--Hb_001946_380 Hb_001399_010 Hb_001399_010 Hb_001863_020--Hb_001399_010 Hb_000525_050 Hb_000525_050 Hb_001863_020--Hb_000525_050 Hb_042202_060 Hb_042202_060 Hb_001863_020--Hb_042202_060 Hb_005167_020 Hb_005167_020 Hb_001863_020--Hb_005167_020 Hb_001723_060 Hb_001723_060 Hb_001138_060--Hb_001723_060 Hb_002762_110 Hb_002762_110 Hb_001138_060--Hb_002762_110 Hb_009778_060 Hb_009778_060 Hb_001138_060--Hb_009778_060 Hb_001195_450 Hb_001195_450 Hb_001138_060--Hb_001195_450 Hb_000318_130 Hb_000318_130 Hb_001138_060--Hb_000318_130 Hb_000077_150 Hb_000077_150 Hb_001138_060--Hb_000077_150 Hb_121089_040 Hb_121089_040 Hb_001946_380--Hb_121089_040 Hb_000622_290 Hb_000622_290 Hb_001946_380--Hb_000622_290 Hb_001946_380--Hb_002762_110 Hb_171718_010 Hb_171718_010 Hb_001946_380--Hb_171718_010 Hb_000107_430 Hb_000107_430 Hb_001946_380--Hb_000107_430 Hb_003875_030 Hb_003875_030 Hb_001946_380--Hb_003875_030 Hb_001399_010--Hb_001138_060 Hb_004128_070 Hb_004128_070 Hb_001399_010--Hb_004128_070 Hb_001277_100 Hb_001277_100 Hb_001399_010--Hb_001277_100 Hb_005725_220 Hb_005725_220 Hb_001399_010--Hb_005725_220 Hb_000167_050 Hb_000167_050 Hb_001399_010--Hb_000167_050 Hb_003411_090 Hb_003411_090 Hb_000525_050--Hb_003411_090 Hb_012244_010 Hb_012244_010 Hb_000525_050--Hb_012244_010 Hb_000525_050--Hb_001399_010 Hb_000525_050--Hb_004128_070 Hb_029920_030 Hb_029920_030 Hb_000525_050--Hb_029920_030 Hb_002876_270 Hb_002876_270 Hb_042202_060--Hb_002876_270 Hb_006816_470 Hb_006816_470 Hb_042202_060--Hb_006816_470 Hb_042202_060--Hb_001138_060 Hb_042202_060--Hb_005167_020 Hb_010422_070 Hb_010422_070 Hb_042202_060--Hb_010422_070 Hb_005167_020--Hb_010422_070 Hb_005167_020--Hb_002876_270 Hb_005167_020--Hb_001399_010 Hb_005167_020--Hb_004128_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.251417 0.306929 0.879553 0.950573 0.123245 0.121497
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.595992 0.447689 1.18388 0.600121 1.93533

CAGE analysis