Hb_001818_060

Information

Type -
Description -
Location Contig1818: 65690-66025
Sequence    

Annotation

kegg
ID rcu:RCOM_0041440
description Cysteine proteinase inhibitor, putative
nr
ID XP_012090835.1
description PREDICTED: cysteine proteinase inhibitor 5-like [Jatropha curcas]
swissprot
ID Q41916
description Cysteine proteinase inhibitor 5 OS=Arabidopsis thaliana GN=CYS5 PE=2 SV=2
trembl
ID A0A067JQS0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03032 PE=4 SV=1
Gene Ontology
ID GO:0004869
description cysteine proteinase inhibitor 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_17690: 65585-66071
cDNA
(Sanger)
(ID:Location)		 037_C08.ab1: 65594-66071 , 038_K18.ab1: 65594-66071 , 039_G12.ab1: 65593-66068

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001818_060 0.0 - - PREDICTED: cysteine proteinase inhibitor 5-like [Jatropha curcas]
2 Hb_000200_170 0.1096846992 - - PREDICTED: E3 ubiquitin-protein ligase RHA2A-like [Populus euphratica]
3 Hb_002849_070 0.1099257631 - - PREDICTED: protein BPS1, chloroplastic [Jatropha curcas]
4 Hb_000465_260 0.1153191384 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HAT4-like [Jatropha curcas]
5 Hb_004631_110 0.1176719266 - - ring finger protein, putative [Ricinus communis]
6 Hb_001195_350 0.1210914686 - - hypothetical protein JCGZ_04423 [Jatropha curcas]
7 Hb_000676_040 0.1224338962 - - hypothetical protein POPTR_0007s13320g [Populus trichocarpa]
8 Hb_000056_080 0.1238639999 - - PREDICTED: protein kinase 2B, chloroplastic [Jatropha curcas]
9 Hb_009646_010 0.1271227334 - - PREDICTED: hyoscyamine 6-dioxygenase-like [Jatropha curcas]
10 Hb_000069_780 0.1279656752 - - atpob1, putative [Ricinus communis]
11 Hb_000203_270 0.132008869 - - alpha-xylosidase, putative [Ricinus communis]
12 Hb_000371_060 0.1331110532 transcription factor TF Family: BES1 BRASSINAZOLE-RESISTANT 1 protein, putative [Ricinus communis]
13 Hb_000270_230 0.1357870641 - - PREDICTED: probable beta-1,3-galactosyltransferase 19 [Jatropha curcas]
14 Hb_003747_210 0.1385028577 - - PREDICTED: uncharacterized protein LOC105630240 [Jatropha curcas]
15 Hb_000110_300 0.1388549755 - - PREDICTED: uncharacterized protein LOC105642013 [Jatropha curcas]
16 Hb_003506_020 0.1405266818 - - PREDICTED: uncharacterized protein LOC105125881 isoform X1 [Populus euphratica]
17 Hb_000059_130 0.1423246034 transcription factor TF Family: GRAS PREDICTED: scarecrow-like protein 1 [Jatropha curcas]
18 Hb_033363_010 0.1453223232 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 8 [Jatropha curcas]
19 Hb_000216_020 0.146567155 - - PREDICTED: benzaldehyde dehydrogenase (NAD(+))-like [Jatropha curcas]
20 Hb_002122_080 0.1466285154 - - -

Gene co-expression network

sample Hb_001818_060 Hb_001818_060 Hb_000200_170 Hb_000200_170 Hb_001818_060--Hb_000200_170 Hb_002849_070 Hb_002849_070 Hb_001818_060--Hb_002849_070 Hb_000465_260 Hb_000465_260 Hb_001818_060--Hb_000465_260 Hb_004631_110 Hb_004631_110 Hb_001818_060--Hb_004631_110 Hb_001195_350 Hb_001195_350 Hb_001818_060--Hb_001195_350 Hb_000676_040 Hb_000676_040 Hb_001818_060--Hb_000676_040 Hb_000200_170--Hb_002849_070 Hb_000056_080 Hb_000056_080 Hb_000200_170--Hb_000056_080 Hb_004724_330 Hb_004724_330 Hb_000200_170--Hb_004724_330 Hb_000203_270 Hb_000203_270 Hb_000200_170--Hb_000203_270 Hb_143766_030 Hb_143766_030 Hb_000200_170--Hb_143766_030 Hb_002849_070--Hb_000056_080 Hb_002849_070--Hb_000203_270 Hb_000735_140 Hb_000735_140 Hb_002849_070--Hb_000735_140 Hb_033363_010 Hb_033363_010 Hb_002849_070--Hb_033363_010 Hb_009646_010 Hb_009646_010 Hb_000465_260--Hb_009646_010 Hb_000056_280 Hb_000056_280 Hb_000465_260--Hb_000056_280 Hb_000465_260--Hb_004631_110 Hb_000025_400 Hb_000025_400 Hb_000465_260--Hb_000025_400 Hb_000465_260--Hb_033363_010 Hb_000840_070 Hb_000840_070 Hb_004631_110--Hb_000840_070 Hb_004631_110--Hb_001195_350 Hb_158696_010 Hb_158696_010 Hb_004631_110--Hb_158696_010 Hb_000059_130 Hb_000059_130 Hb_004631_110--Hb_000059_130 Hb_000371_060 Hb_000371_060 Hb_001195_350--Hb_000371_060 Hb_010068_070 Hb_010068_070 Hb_001195_350--Hb_010068_070 Hb_001195_350--Hb_000840_070 Hb_001195_350--Hb_033363_010 Hb_002524_020 Hb_002524_020 Hb_001195_350--Hb_002524_020 Hb_000676_040--Hb_002524_020 Hb_000270_230 Hb_000270_230 Hb_000676_040--Hb_000270_230 Hb_000676_040--Hb_000371_060 Hb_001257_100 Hb_001257_100 Hb_000676_040--Hb_001257_100 Hb_008667_060 Hb_008667_060 Hb_000676_040--Hb_008667_060 Hb_000676_040--Hb_000059_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
74.9485 468.256 150.985 402.735 46.3454 76.8174
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
95.2199 73.7383 29.3569 200.206 105.731

CAGE analysis