Hb_000866_280

Information

Type -
Description -
Location Contig866: 196265-200334
Sequence    

Annotation

kegg
ID vvi:104881914
description seven transmembrane domain-containing tyrosine-protein kinase 1-like
nr
ID XP_012083842.1
description PREDICTED: seven transmembrane domain-containing tyrosine-protein kinase 1-like [Jatropha curcas]
swissprot
ID Q54N73
description Seven transmembrane domain-containing tyrosine-protein kinase 1 OS=Dictyostelium discoideum GN=7tmk1 PE=3 SV=1
trembl
ID A0A067K0Q0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14409 PE=4 SV=1
Gene Ontology
ID GO:0016021
description seven transmembrane domain-containing tyrosine-protein kinase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_60965: 197469-199256
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000866_280 0.0 - - PREDICTED: seven transmembrane domain-containing tyrosine-protein kinase 1-like [Jatropha curcas]
2 Hb_000010_240 0.1121795936 - - Protein bem46, putative [Ricinus communis]
3 Hb_003621_020 0.123455204 transcription factor TF Family: MYB-related PREDICTED: transcription factor DIVARICATA-like [Jatropha curcas]
4 Hb_000059_340 0.1265040599 transcription factor TF Family: SOH1 uncharacterized protein LOC100527879 [Glycine max]
5 Hb_000407_040 0.1324847798 transcription factor TF Family: C3H zinc finger protein, putative [Ricinus communis]
6 Hb_001195_040 0.1346183162 - - PREDICTED: proteasome subunit alpha type-1-B-like [Gossypium raimondii]
7 Hb_004800_250 0.1349589524 - - PREDICTED: protein N-lysine methyltransferase METTL21A [Jatropha curcas]
8 Hb_005488_140 0.1421901791 - - 30S ribosomal protein S5, putative [Ricinus communis]
9 Hb_004128_200 0.1424039306 - - PREDICTED: uncharacterized protein LOC105642137 [Jatropha curcas]
10 Hb_000291_030 0.1459521032 - - PREDICTED: mitogen-activated protein kinase kinase kinase 1-like [Eucalyptus grandis]
11 Hb_004375_080 0.1476763424 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF073 [Jatropha curcas]
12 Hb_180424_010 0.1480102447 - - Charged multivesicular body protein, putative [Ricinus communis]
13 Hb_006261_090 0.1497286812 - - PREDICTED: exosome complex exonuclease RRP46 homolog [Jatropha curcas]
14 Hb_000009_530 0.1501887309 - - PREDICTED: uncharacterized protein LOC105639628 [Jatropha curcas]
15 Hb_153553_030 0.1503366626 - - PREDICTED: zinc finger protein GIS2 [Jatropha curcas]
16 Hb_092337_020 0.1515106653 - - hypothetical protein B456_013G264900 [Gossypium raimondii]
17 Hb_027073_030 0.1523565095 - - PREDICTED: mediator of RNA polymerase II transcription subunit 27 [Jatropha curcas]
18 Hb_000661_140 0.1544618613 - - PREDICTED: uncharacterized protein LOC105648317 isoform X2 [Jatropha curcas]
19 Hb_001671_040 0.1547972114 - - PREDICTED: serine/arginine-rich splicing factor RS31-like isoform X1 [Populus euphratica]
20 Hb_000510_330 0.155913692 - - PREDICTED: tryptophan synthase alpha chain-like [Jatropha curcas]

Gene co-expression network

sample Hb_000866_280 Hb_000866_280 Hb_000010_240 Hb_000010_240 Hb_000866_280--Hb_000010_240 Hb_003621_020 Hb_003621_020 Hb_000866_280--Hb_003621_020 Hb_000059_340 Hb_000059_340 Hb_000866_280--Hb_000059_340 Hb_000407_040 Hb_000407_040 Hb_000866_280--Hb_000407_040 Hb_001195_040 Hb_001195_040 Hb_000866_280--Hb_001195_040 Hb_004800_250 Hb_004800_250 Hb_000866_280--Hb_004800_250 Hb_000010_240--Hb_000407_040 Hb_005488_140 Hb_005488_140 Hb_000010_240--Hb_005488_140 Hb_000010_240--Hb_004800_250 Hb_000010_240--Hb_000059_340 Hb_000061_470 Hb_000061_470 Hb_000010_240--Hb_000061_470 Hb_000983_090 Hb_000983_090 Hb_000010_240--Hb_000983_090 Hb_153553_030 Hb_153553_030 Hb_003621_020--Hb_153553_030 Hb_000009_530 Hb_000009_530 Hb_003621_020--Hb_000009_530 Hb_001898_240 Hb_001898_240 Hb_003621_020--Hb_001898_240 Hb_000638_290 Hb_000638_290 Hb_003621_020--Hb_000638_290 Hb_012016_010 Hb_012016_010 Hb_003621_020--Hb_012016_010 Hb_180424_010 Hb_180424_010 Hb_003621_020--Hb_180424_010 Hb_000059_340--Hb_000407_040 Hb_002681_060 Hb_002681_060 Hb_000059_340--Hb_002681_060 Hb_006261_090 Hb_006261_090 Hb_000059_340--Hb_006261_090 Hb_000059_340--Hb_000061_470 Hb_000407_040--Hb_002681_060 Hb_000407_040--Hb_000061_470 Hb_001477_070 Hb_001477_070 Hb_000407_040--Hb_001477_070 Hb_008103_110 Hb_008103_110 Hb_000407_040--Hb_008103_110 Hb_000661_140 Hb_000661_140 Hb_001195_040--Hb_000661_140 Hb_002639_150 Hb_002639_150 Hb_001195_040--Hb_002639_150 Hb_000853_430 Hb_000853_430 Hb_001195_040--Hb_000853_430 Hb_000926_310 Hb_000926_310 Hb_001195_040--Hb_000926_310 Hb_001934_030 Hb_001934_030 Hb_001195_040--Hb_001934_030 Hb_000003_600 Hb_000003_600 Hb_001195_040--Hb_000003_600 Hb_000185_070 Hb_000185_070 Hb_004800_250--Hb_000185_070 Hb_004800_250--Hb_180424_010 Hb_012762_030 Hb_012762_030 Hb_004800_250--Hb_012762_030 Hb_004800_250--Hb_005488_140 Hb_004800_250--Hb_000853_430
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.76447 1.5631 2.89534 0.380422 0.972939 1.09825
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.821044 2.01794 0.965075 0.876644 0.247513

CAGE analysis