Hb_000983_090

Information

Type -
Description -
Location Contig983: 71652-75824
Sequence    

Annotation

kegg
ID rcu:RCOM_1595540
description big map kinase/bmk, putative (EC:2.7.11.24)
nr
ID XP_012071921.1
description PREDICTED: mitogen-activated protein kinase homolog NTF3 [Jatropha curcas]
swissprot
ID Q40517
description Mitogen-activated protein kinase homolog NTF3 OS=Nicotiana tabacum GN=NTF3 PE=1 SV=1
trembl
ID A0A067KQQ4
description Mitogen-activated protein kinase OS=Jatropha curcas GN=JCGZ_04476 PE=3 SV=1
Gene Ontology
ID GO:0005622
description mitogen-activated protein kinase homolog ntf3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_64454: 71812-75792
cDNA
(Sanger)
(ID:Location)		 024_A24.ab1: 74494-75734 , 051_K07.ab1: 74540-75790

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000983_090 0.0 - - PREDICTED: mitogen-activated protein kinase homolog NTF3 [Jatropha curcas]
2 Hb_000856_190 0.0658863661 - - PREDICTED: dnaJ homolog subfamily B member 1 [Jatropha curcas]
3 Hb_002411_030 0.0668639995 transcription factor TF Family: NF-YC PREDICTED: dr1-associated corepressor homolog [Jatropha curcas]
4 Hb_012762_030 0.0692317431 - - PREDICTED: uncharacterized protein LOC105634062 [Jatropha curcas]
5 Hb_004204_170 0.0776080751 - - synaptosomal associated protein, putative [Ricinus communis]
6 Hb_012055_060 0.0810047743 - - PREDICTED: uncharacterized protein LOC105639799 isoform X1 [Jatropha curcas]
7 Hb_000331_670 0.0862192414 - - PREDICTED: protein tipD [Jatropha curcas]
8 Hb_008511_090 0.0882835012 - - PREDICTED: BTB/POZ domain-containing protein At3g05675-like [Jatropha curcas]
9 Hb_005016_160 0.0899556293 - - PREDICTED: transcription initiation factor TFIID subunit 8 [Jatropha curcas]
10 Hb_009767_100 0.0910554337 - - PREDICTED: FRIGIDA-like protein 4a [Jatropha curcas]
11 Hb_000818_010 0.0915827252 - - Calmodulin-domain protein kinase 5 isoform 1 [Theobroma cacao]
12 Hb_001005_190 0.0924053002 - - PREDICTED: UPF0496 protein At3g19330-like isoform X1 [Jatropha curcas]
13 Hb_004208_030 0.0947187835 transcription factor TF Family: MYB-related PREDICTED: TSL-kinase interacting protein 1 [Jatropha curcas]
14 Hb_000538_270 0.0953004503 - - PREDICTED: serine/threonine-protein kinase HT1-like [Citrus sinensis]
15 Hb_000661_290 0.0973256224 - - PREDICTED: NAD(H) kinase 1-like isoform X1 [Populus euphratica]
16 Hb_003082_010 0.0984132288 - - PREDICTED: putative F-box protein At3g10240 [Jatropha curcas]
17 Hb_005000_190 0.0984594308 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 64 [Jatropha curcas]
18 Hb_007163_120 0.0988742954 - - PREDICTED: COMPASS-like H3K4 histone methylase component WDR5A [Jatropha curcas]
19 Hb_022256_020 0.0993420411 - - PREDICTED: pentatricopeptide repeat-containing protein At4g35130, chloroplastic [Jatropha curcas]
20 Hb_001728_050 0.1001794703 - - PREDICTED: E3 ubiquitin-protein ligase RBBP6-like [Jatropha curcas]

Gene co-expression network

sample Hb_000983_090 Hb_000983_090 Hb_000856_190 Hb_000856_190 Hb_000983_090--Hb_000856_190 Hb_002411_030 Hb_002411_030 Hb_000983_090--Hb_002411_030 Hb_012762_030 Hb_012762_030 Hb_000983_090--Hb_012762_030 Hb_004204_170 Hb_004204_170 Hb_000983_090--Hb_004204_170 Hb_012055_060 Hb_012055_060 Hb_000983_090--Hb_012055_060 Hb_000331_670 Hb_000331_670 Hb_000983_090--Hb_000331_670 Hb_000856_190--Hb_004204_170 Hb_000818_010 Hb_000818_010 Hb_000856_190--Hb_000818_010 Hb_000334_220 Hb_000334_220 Hb_000856_190--Hb_000334_220 Hb_000085_100 Hb_000085_100 Hb_000856_190--Hb_000085_100 Hb_000856_190--Hb_012762_030 Hb_005137_050 Hb_005137_050 Hb_002411_030--Hb_005137_050 Hb_005541_010 Hb_005541_010 Hb_002411_030--Hb_005541_010 Hb_001728_050 Hb_001728_050 Hb_002411_030--Hb_001728_050 Hb_000130_240 Hb_000130_240 Hb_002411_030--Hb_000130_240 Hb_005675_040 Hb_005675_040 Hb_002411_030--Hb_005675_040 Hb_000185_070 Hb_000185_070 Hb_012762_030--Hb_000185_070 Hb_004208_030 Hb_004208_030 Hb_012762_030--Hb_004208_030 Hb_000926_090 Hb_000926_090 Hb_012762_030--Hb_000926_090 Hb_002754_010 Hb_002754_010 Hb_012762_030--Hb_002754_010 Hb_002073_200 Hb_002073_200 Hb_012762_030--Hb_002073_200 Hb_004204_170--Hb_000085_100 Hb_001617_050 Hb_001617_050 Hb_004204_170--Hb_001617_050 Hb_001178_140 Hb_001178_140 Hb_004204_170--Hb_001178_140 Hb_001277_270 Hb_001277_270 Hb_004204_170--Hb_001277_270 Hb_000243_250 Hb_000243_250 Hb_012055_060--Hb_000243_250 Hb_005016_160 Hb_005016_160 Hb_012055_060--Hb_005016_160 Hb_003055_060 Hb_003055_060 Hb_012055_060--Hb_003055_060 Hb_001005_190 Hb_001005_190 Hb_012055_060--Hb_001005_190 Hb_011491_010 Hb_011491_010 Hb_012055_060--Hb_011491_010 Hb_008511_090 Hb_008511_090 Hb_012055_060--Hb_008511_090 Hb_015934_040 Hb_015934_040 Hb_000331_670--Hb_015934_040 Hb_003211_020 Hb_003211_020 Hb_000331_670--Hb_003211_020 Hb_001157_040 Hb_001157_040 Hb_000331_670--Hb_001157_040 Hb_007163_120 Hb_007163_120 Hb_000331_670--Hb_007163_120 Hb_013399_100 Hb_013399_100 Hb_000331_670--Hb_013399_100 Hb_021576_110 Hb_021576_110 Hb_000331_670--Hb_021576_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
50.6237 68.5894 46.6561 27.7055 35.3054 35.2721
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
35.4666 42.6483 66.7827 32.0803 18.795

CAGE analysis