Hb_015934_040

Information

Type -
Description -
Location Contig15934: 16191-17117
Sequence    

Annotation

kegg
ID pop:POPTR_0005s22320g
description POPTRDRAFT_651665; myosin heavy chain-related family protein
nr
ID XP_012077895.1
description PREDICTED: protein Hook homolog 3-like [Jatropha curcas]
swissprot
ID Q9SHJ6
description Peroxisomal and mitochondrial division factor 2 OS=Arabidopsis thaliana GN=PMD2 PE=1 SV=1
trembl
ID A0A067KA03
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13608 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_14146: 16156-17392
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_015934_040 0.0 - - PREDICTED: protein Hook homolog 3-like [Jatropha curcas]
2 Hb_010618_010 0.051769978 - - PREDICTED: inactive poly [ADP-ribose] polymerase RCD1 [Jatropha curcas]
3 Hb_000297_010 0.0528968179 - - PREDICTED: uncharacterized protein LOC105637916 isoform X2 [Jatropha curcas]
4 Hb_000331_670 0.0550818038 - - PREDICTED: protein tipD [Jatropha curcas]
5 Hb_010128_080 0.0554915022 - - PREDICTED: pentatricopeptide repeat-containing protein At1g63330-like isoform X1 [Jatropha curcas]
6 Hb_000032_520 0.0557298329 - - PREDICTED: F-box protein SKIP8-like [Jatropha curcas]
7 Hb_001248_060 0.0565498112 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000331_550 0.0584857277 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 67 [Jatropha curcas]
9 Hb_007163_120 0.060183983 - - PREDICTED: COMPASS-like H3K4 histone methylase component WDR5A [Jatropha curcas]
10 Hb_013399_100 0.0620236941 - - conserved hypothetical protein [Ricinus communis]
11 Hb_001409_020 0.0629175112 transcription factor TF Family: mTERF PREDICTED: uncharacterized protein LOC105638648 [Jatropha curcas]
12 Hb_001157_040 0.0661784959 - - casein kinase, putative [Ricinus communis]
13 Hb_000185_030 0.0663131757 - - PREDICTED: arginine-glutamic acid dipeptide repeats protein-like isoform X2 [Jatropha curcas]
14 Hb_022115_020 0.0663660093 - - PREDICTED: glucan endo-1,3-beta-glucosidase 11 isoform X2 [Jatropha curcas]
15 Hb_000009_560 0.0670019845 - - PREDICTED: extra-large guanine nucleotide-binding protein 1 [Jatropha curcas]
16 Hb_002450_020 0.0670052833 - - PREDICTED: probable transcriptional regulator SLK2 [Jatropha curcas]
17 Hb_001538_130 0.067827519 - - conserved hypothetical protein [Ricinus communis]
18 Hb_001838_060 0.0680430021 transcription factor TF Family: bZIP PREDICTED: transcription factor HBP-1b(c38)-like isoform X3 [Jatropha curcas]
19 Hb_000563_320 0.0683330446 - - PREDICTED: induced during hyphae development protein 1 [Jatropha curcas]
20 Hb_009767_110 0.0683793949 - - -

Gene co-expression network

sample Hb_015934_040 Hb_015934_040 Hb_010618_010 Hb_010618_010 Hb_015934_040--Hb_010618_010 Hb_000297_010 Hb_000297_010 Hb_015934_040--Hb_000297_010 Hb_000331_670 Hb_000331_670 Hb_015934_040--Hb_000331_670 Hb_010128_080 Hb_010128_080 Hb_015934_040--Hb_010128_080 Hb_000032_520 Hb_000032_520 Hb_015934_040--Hb_000032_520 Hb_001248_060 Hb_001248_060 Hb_015934_040--Hb_001248_060 Hb_010618_010--Hb_001248_060 Hb_001409_020 Hb_001409_020 Hb_010618_010--Hb_001409_020 Hb_000225_040 Hb_000225_040 Hb_010618_010--Hb_000225_040 Hb_002518_280 Hb_002518_280 Hb_010618_010--Hb_002518_280 Hb_011995_010 Hb_011995_010 Hb_010618_010--Hb_011995_010 Hb_000185_030 Hb_000185_030 Hb_000297_010--Hb_000185_030 Hb_004724_150 Hb_004724_150 Hb_000297_010--Hb_004724_150 Hb_000245_040 Hb_000245_040 Hb_000297_010--Hb_000245_040 Hb_000041_100 Hb_000041_100 Hb_000297_010--Hb_000041_100 Hb_000840_250 Hb_000840_250 Hb_000297_010--Hb_000840_250 Hb_003211_020 Hb_003211_020 Hb_000331_670--Hb_003211_020 Hb_001157_040 Hb_001157_040 Hb_000331_670--Hb_001157_040 Hb_007163_120 Hb_007163_120 Hb_000331_670--Hb_007163_120 Hb_013399_100 Hb_013399_100 Hb_000331_670--Hb_013399_100 Hb_021576_110 Hb_021576_110 Hb_000331_670--Hb_021576_110 Hb_000395_190 Hb_000395_190 Hb_010128_080--Hb_000395_190 Hb_000099_080 Hb_000099_080 Hb_010128_080--Hb_000099_080 Hb_000866_220 Hb_000866_220 Hb_010128_080--Hb_000866_220 Hb_000003_250 Hb_000003_250 Hb_010128_080--Hb_000003_250 Hb_089032_040 Hb_089032_040 Hb_010128_080--Hb_089032_040 Hb_001538_130 Hb_001538_130 Hb_000032_520--Hb_001538_130 Hb_000003_590 Hb_000003_590 Hb_000032_520--Hb_000003_590 Hb_000792_010 Hb_000792_010 Hb_000032_520--Hb_000792_010 Hb_019863_070 Hb_019863_070 Hb_000032_520--Hb_019863_070 Hb_000032_520--Hb_010618_010 Hb_001248_060--Hb_001409_020 Hb_001248_060--Hb_011995_010 Hb_000289_060 Hb_000289_060 Hb_001248_060--Hb_000289_060 Hb_001408_040 Hb_001408_040 Hb_001248_060--Hb_001408_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
30.417 38.1156 24.0087 32.1492 31.0581 37.9474
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
28.9313 39.6746 45.7525 30.7711 27.4645

CAGE analysis