Hb_000289_060

Information

Type -
Description -
Location Contig289: 118664-119881
Sequence    

Annotation

kegg
ID rcu:RCOM_0723790
description hydrolase, putative
nr
ID XP_012075416.1
description PREDICTED: uncharacterized protein At1g18480 [Jatropha curcas]
swissprot
ID Q944L7
description Uncharacterized protein At1g18480 OS=Arabidopsis thaliana GN=At1g18480 PE=2 SV=1
trembl
ID A0A067KSA3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10689 PE=4 SV=1
Gene Ontology
ID GO:0005829
description calcineurin-like metallo-phosphoesterase superfamily protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 048_M24r.ab1: 120636-123851

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000289_060 0.0 - - PREDICTED: uncharacterized protein At1g18480 [Jatropha curcas]
2 Hb_004221_020 0.0494363287 - - protein binding protein, putative [Ricinus communis]
3 Hb_001248_060 0.0541337388 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000538_270 0.058763324 - - PREDICTED: serine/threonine-protein kinase HT1-like [Citrus sinensis]
5 Hb_002686_030 0.0593720815 - - PREDICTED: uncharacterized protein LOC105632635 isoform X1 [Jatropha curcas]
6 Hb_010618_010 0.0611060551 - - PREDICTED: inactive poly [ADP-ribose] polymerase RCD1 [Jatropha curcas]
7 Hb_077562_050 0.0626594932 transcription factor TF Family: NF-YC PREDICTED: dr1-associated corepressor homolog [Jatropha curcas]
8 Hb_000757_060 0.0649125793 - - hypothetical protein PRUPE_ppa001141mg [Prunus persica]
9 Hb_011995_010 0.0708928075 - - dc50, putative [Ricinus communis]
10 Hb_000453_170 0.0716036461 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
11 Hb_000010_400 0.0731931562 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 67 [Jatropha curcas]
12 Hb_007416_180 0.0738195658 - - PREDICTED: exocyst complex component EXO70A1 [Jatropha curcas]
13 Hb_002499_040 0.0745551404 - - PREDICTED: probable serine/threonine-protein kinase GCN2 isoform X2 [Jatropha curcas]
14 Hb_010139_040 0.0757318237 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
15 Hb_001409_020 0.0758075082 transcription factor TF Family: mTERF PREDICTED: uncharacterized protein LOC105638648 [Jatropha curcas]
16 Hb_000029_050 0.0758095823 - - expressed protein, putative [Ricinus communis]
17 Hb_000165_250 0.0763475383 - - PREDICTED: ankyrin repeat and SAM domain-containing protein 3-like [Jatropha curcas]
18 Hb_002835_370 0.0763601528 - - histone deacetylase 1, 2 ,3, putative [Ricinus communis]
19 Hb_001242_060 0.0767896684 - - PREDICTED: uncharacterized protein LOC105139508 [Populus euphratica]
20 Hb_015934_040 0.0779127986 - - PREDICTED: protein Hook homolog 3-like [Jatropha curcas]

Gene co-expression network

sample Hb_000289_060 Hb_000289_060 Hb_004221_020 Hb_004221_020 Hb_000289_060--Hb_004221_020 Hb_001248_060 Hb_001248_060 Hb_000289_060--Hb_001248_060 Hb_000538_270 Hb_000538_270 Hb_000289_060--Hb_000538_270 Hb_002686_030 Hb_002686_030 Hb_000289_060--Hb_002686_030 Hb_010618_010 Hb_010618_010 Hb_000289_060--Hb_010618_010 Hb_077562_050 Hb_077562_050 Hb_000289_060--Hb_077562_050 Hb_002835_370 Hb_002835_370 Hb_004221_020--Hb_002835_370 Hb_010139_040 Hb_010139_040 Hb_004221_020--Hb_010139_040 Hb_000165_250 Hb_000165_250 Hb_004221_020--Hb_000165_250 Hb_000072_220 Hb_000072_220 Hb_004221_020--Hb_000072_220 Hb_002025_020 Hb_002025_020 Hb_004221_020--Hb_002025_020 Hb_001248_060--Hb_010618_010 Hb_001409_020 Hb_001409_020 Hb_001248_060--Hb_001409_020 Hb_011995_010 Hb_011995_010 Hb_001248_060--Hb_011995_010 Hb_015934_040 Hb_015934_040 Hb_001248_060--Hb_015934_040 Hb_001408_040 Hb_001408_040 Hb_001248_060--Hb_001408_040 Hb_007416_180 Hb_007416_180 Hb_000538_270--Hb_007416_180 Hb_000757_060 Hb_000757_060 Hb_000538_270--Hb_000757_060 Hb_000538_270--Hb_002686_030 Hb_001005_190 Hb_001005_190 Hb_000538_270--Hb_001005_190 Hb_001157_040 Hb_001157_040 Hb_000538_270--Hb_001157_040 Hb_000556_160 Hb_000556_160 Hb_002686_030--Hb_000556_160 Hb_017862_020 Hb_017862_020 Hb_002686_030--Hb_017862_020 Hb_007163_120 Hb_007163_120 Hb_002686_030--Hb_007163_120 Hb_002499_040 Hb_002499_040 Hb_002686_030--Hb_002499_040 Hb_010618_010--Hb_001409_020 Hb_010618_010--Hb_015934_040 Hb_000225_040 Hb_000225_040 Hb_010618_010--Hb_000225_040 Hb_002518_280 Hb_002518_280 Hb_010618_010--Hb_002518_280 Hb_010618_010--Hb_011995_010 Hb_077562_050--Hb_000538_270 Hb_000010_400 Hb_000010_400 Hb_077562_050--Hb_000010_400 Hb_000453_170 Hb_000453_170 Hb_077562_050--Hb_000453_170 Hb_027295_050 Hb_027295_050 Hb_077562_050--Hb_027295_050 Hb_004155_010 Hb_004155_010 Hb_077562_050--Hb_004155_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.14057 5.72628 4.57021 3.52938 5.98379 6.82307
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.78624 6.70912 7.35405 5.33606 4.22085

CAGE analysis