Hb_000866_220

Information

Type -
Description -
Location Contig866: 170133-173848
Sequence    

Annotation

kegg
ID rcu:RCOM_1615180
description calmodulin-binding heat-shock protein, putative
nr
ID XP_012083399.1
description PREDICTED: uncharacterized protein LOC105642989 [Jatropha curcas]
swissprot
ID Q9Y4D2
description Sn1-specific diacylglycerol lipase alpha OS=Homo sapiens GN=DAGLA PE=1 SV=3
trembl
ID A0A067JXL2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14403 PE=4 SV=1
Gene Ontology
ID GO:0016787
description lipase class 3 family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_60952: 170201-173253 , PASA_asmbl_60953: 170710-170836 , PASA_asmbl_60954: 173262-173364 , PASA_asmbl_60955: 173405-174551 , PASA_asmbl_60956: 173405-174000
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000866_220 0.0 - - PREDICTED: uncharacterized protein LOC105642989 [Jatropha curcas]
2 Hb_001157_040 0.0446800004 - - casein kinase, putative [Ricinus communis]
3 Hb_000056_240 0.04706976 - - PREDICTED: cullin-3A [Jatropha curcas]
4 Hb_008725_260 0.0546866598 - - PREDICTED: uncharacterized protein LOC105642597 [Jatropha curcas]
5 Hb_010128_080 0.0608621324 - - PREDICTED: pentatricopeptide repeat-containing protein At1g63330-like isoform X1 [Jatropha curcas]
6 Hb_002046_180 0.0636809314 - - PREDICTED: uncharacterized protein LOC105641295 [Jatropha curcas]
7 Hb_000189_560 0.0647338995 transcription factor TF Family: GeBP PREDICTED: mediator-associated protein 1 [Jatropha curcas]
8 Hb_002110_150 0.0664124927 - - PREDICTED: serine/threonine-protein kinase PEPKR2 [Jatropha curcas]
9 Hb_001242_060 0.0669019407 - - PREDICTED: uncharacterized protein LOC105139508 [Populus euphratica]
10 Hb_031527_040 0.0681536905 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 5 isoform X1 [Jatropha curcas]
11 Hb_000331_670 0.0682538902 - - PREDICTED: protein tipD [Jatropha curcas]
12 Hb_009178_030 0.0688209203 - - conserved hypothetical protein [Ricinus communis]
13 Hb_007532_030 0.0692298665 - - PREDICTED: F-box/kelch-repeat protein At1g30090 [Jatropha curcas]
14 Hb_012019_010 0.0701333714 - - PREDICTED: F-box/kelch-repeat protein SKIP30 [Jatropha curcas]
15 Hb_015934_040 0.0707587331 - - PREDICTED: protein Hook homolog 3-like [Jatropha curcas]
16 Hb_000538_270 0.0708455575 - - PREDICTED: serine/threonine-protein kinase HT1-like [Citrus sinensis]
17 Hb_001838_060 0.0710292348 transcription factor TF Family: bZIP PREDICTED: transcription factor HBP-1b(c38)-like isoform X3 [Jatropha curcas]
18 Hb_000876_070 0.0733178312 - - protein phosphatase 2a, regulatory subunit, putative [Ricinus communis]
19 Hb_005779_060 0.0738339714 - - PREDICTED: uncharacterized protein LOC105643212 isoform X2 [Jatropha curcas]
20 Hb_001633_210 0.0741858889 - - PREDICTED: RING finger protein 10 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_000866_220 Hb_000866_220 Hb_001157_040 Hb_001157_040 Hb_000866_220--Hb_001157_040 Hb_000056_240 Hb_000056_240 Hb_000866_220--Hb_000056_240 Hb_008725_260 Hb_008725_260 Hb_000866_220--Hb_008725_260 Hb_010128_080 Hb_010128_080 Hb_000866_220--Hb_010128_080 Hb_002046_180 Hb_002046_180 Hb_000866_220--Hb_002046_180 Hb_000189_560 Hb_000189_560 Hb_000866_220--Hb_000189_560 Hb_001838_060 Hb_001838_060 Hb_001157_040--Hb_001838_060 Hb_000563_320 Hb_000563_320 Hb_001157_040--Hb_000563_320 Hb_000016_250 Hb_000016_250 Hb_001157_040--Hb_000016_250 Hb_000331_670 Hb_000331_670 Hb_001157_040--Hb_000331_670 Hb_000538_270 Hb_000538_270 Hb_001157_040--Hb_000538_270 Hb_002391_310 Hb_002391_310 Hb_000056_240--Hb_002391_310 Hb_004374_070 Hb_004374_070 Hb_000056_240--Hb_004374_070 Hb_085863_030 Hb_085863_030 Hb_000056_240--Hb_085863_030 Hb_000056_240--Hb_002046_180 Hb_002110_150 Hb_002110_150 Hb_000056_240--Hb_002110_150 Hb_008725_260--Hb_002110_150 Hb_008725_260--Hb_002046_180 Hb_009178_030 Hb_009178_030 Hb_008725_260--Hb_009178_030 Hb_000876_070 Hb_000876_070 Hb_008725_260--Hb_000876_070 Hb_007532_030 Hb_007532_030 Hb_008725_260--Hb_007532_030 Hb_000395_190 Hb_000395_190 Hb_010128_080--Hb_000395_190 Hb_015934_040 Hb_015934_040 Hb_010128_080--Hb_015934_040 Hb_000099_080 Hb_000099_080 Hb_010128_080--Hb_000099_080 Hb_000003_250 Hb_000003_250 Hb_010128_080--Hb_000003_250 Hb_089032_040 Hb_089032_040 Hb_010128_080--Hb_089032_040 Hb_012019_010 Hb_012019_010 Hb_002046_180--Hb_012019_010 Hb_002046_180--Hb_002110_150 Hb_005779_060 Hb_005779_060 Hb_002046_180--Hb_005779_060 Hb_002046_180--Hb_000876_070 Hb_005463_100 Hb_005463_100 Hb_002046_180--Hb_005463_100 Hb_000189_560--Hb_007532_030 Hb_000185_030 Hb_000185_030 Hb_000189_560--Hb_000185_030 Hb_007508_090 Hb_007508_090 Hb_000189_560--Hb_007508_090 Hb_000710_060 Hb_000710_060 Hb_000189_560--Hb_000710_060 Hb_004355_020 Hb_004355_020 Hb_000189_560--Hb_004355_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.80869 5.83951 2.63948 3.66539 3.90075 5.13759
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.37613 7.63057 7.08495 3.94018 3.11229

CAGE analysis