Hb_000815_130

Information

Type -
Description -
Location Contig815: 163872-167830
Sequence    

Annotation

kegg
ID rcu:RCOM_0837410
description hypothetical protein
nr
ID XP_012067680.1
description PREDICTED: uncharacterized endoplasmic reticulum membrane protein C16E8.02-like [Jatropha curcas]
swissprot
ID O13737
description Uncharacterized endoplasmic reticulum membrane protein C16E8.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC16E8.02 PE=4 SV=2
trembl
ID A0A067L9T0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15632 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_59357: 163830-166930
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000815_130 0.0 - - PREDICTED: uncharacterized endoplasmic reticulum membrane protein C16E8.02-like [Jatropha curcas]
2 Hb_011344_160 0.1255827288 - - PREDICTED: primary amine oxidase [Jatropha curcas]
3 Hb_000100_180 0.1328792398 - - PREDICTED: probable acyl-activating enzyme 16, chloroplastic [Jatropha curcas]
4 Hb_003582_080 0.1451427744 - - iaa-alanine resistance protein, putative [Ricinus communis]
5 Hb_003050_270 0.1574860971 - - PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic [Jatropha curcas]
6 Hb_001511_240 0.1603142197 - - PREDICTED: uncharacterized protein LOC105133574 isoform X3 [Populus euphratica]
7 Hb_000172_540 0.1613151288 - - hypothetical protein POPTR_0005s08350g [Populus trichocarpa]
8 Hb_006373_010 0.1639066792 - - Potassium transporter 11 [Gossypium arboreum]
9 Hb_001500_050 0.1660404333 transcription factor TF Family: NAC NAC transcription factor [Hevea brasiliensis]
10 Hb_002022_060 0.1673027903 - - PREDICTED: uncharacterized protein LOC105637912 [Jatropha curcas]
11 Hb_002946_160 0.1677950327 - - PREDICTED: uricase-2 isozyme 2 [Jatropha curcas]
12 Hb_005488_020 0.1701584175 - - PREDICTED: putative mediator of RNA polymerase II transcription subunit 26 [Jatropha curcas]
13 Hb_000521_080 0.1704606599 - - Zinc finger BED domain-containing 4 [Gossypium arboreum]
14 Hb_001049_090 0.1714762616 - - 6-phosphogluconate dehydrogenase, putative [Ricinus communis]
15 Hb_023480_010 0.1723310356 - - cellular nucleic acid binding protein, putative [Ricinus communis]
16 Hb_000009_090 0.173867215 transcription factor TF Family: bZIP G-box-binding factor, putative [Ricinus communis]
17 Hb_000202_040 0.1739631422 - - PREDICTED: E3 ubiquitin-protein ligase BOI-like [Jatropha curcas]
18 Hb_002542_020 0.1750048255 - - PREDICTED: uncharacterized protein LOC105634003 isoform X1 [Jatropha curcas]
19 Hb_001124_160 0.1767177195 - - PREDICTED: probable serine/threonine-protein kinase At1g54610 [Jatropha curcas]
20 Hb_007441_130 0.1768723214 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000815_130 Hb_000815_130 Hb_011344_160 Hb_011344_160 Hb_000815_130--Hb_011344_160 Hb_000100_180 Hb_000100_180 Hb_000815_130--Hb_000100_180 Hb_003582_080 Hb_003582_080 Hb_000815_130--Hb_003582_080 Hb_003050_270 Hb_003050_270 Hb_000815_130--Hb_003050_270 Hb_001511_240 Hb_001511_240 Hb_000815_130--Hb_001511_240 Hb_000172_540 Hb_000172_540 Hb_000815_130--Hb_000172_540 Hb_001500_050 Hb_001500_050 Hb_011344_160--Hb_001500_050 Hb_007441_130 Hb_007441_130 Hb_011344_160--Hb_007441_130 Hb_011344_160--Hb_001511_240 Hb_006373_010 Hb_006373_010 Hb_011344_160--Hb_006373_010 Hb_000044_040 Hb_000044_040 Hb_011344_160--Hb_000044_040 Hb_023480_010 Hb_023480_010 Hb_011344_160--Hb_023480_010 Hb_000544_090 Hb_000544_090 Hb_000100_180--Hb_000544_090 Hb_000100_180--Hb_023480_010 Hb_002022_060 Hb_002022_060 Hb_000100_180--Hb_002022_060 Hb_001049_090 Hb_001049_090 Hb_000100_180--Hb_001049_090 Hb_000100_160 Hb_000100_160 Hb_000100_180--Hb_000100_160 Hb_000100_180--Hb_007441_130 Hb_011609_140 Hb_011609_140 Hb_003582_080--Hb_011609_140 Hb_001214_060 Hb_001214_060 Hb_003582_080--Hb_001214_060 Hb_169631_010 Hb_169631_010 Hb_003582_080--Hb_169631_010 Hb_005730_120 Hb_005730_120 Hb_003582_080--Hb_005730_120 Hb_033834_030 Hb_033834_030 Hb_003582_080--Hb_033834_030 Hb_000521_120 Hb_000521_120 Hb_003582_080--Hb_000521_120 Hb_000521_080 Hb_000521_080 Hb_003050_270--Hb_000521_080 Hb_000640_170 Hb_000640_170 Hb_003050_270--Hb_000640_170 Hb_001922_170 Hb_001922_170 Hb_003050_270--Hb_001922_170 Hb_000035_500 Hb_000035_500 Hb_003050_270--Hb_000035_500 Hb_073973_100 Hb_073973_100 Hb_003050_270--Hb_073973_100 Hb_042729_020 Hb_042729_020 Hb_003050_270--Hb_042729_020 Hb_007445_010 Hb_007445_010 Hb_001511_240--Hb_007445_010 Hb_001511_240--Hb_006373_010 Hb_009193_120 Hb_009193_120 Hb_001511_240--Hb_009193_120 Hb_007083_030 Hb_007083_030 Hb_001511_240--Hb_007083_030 Hb_007336_010 Hb_007336_010 Hb_001511_240--Hb_007336_010 Hb_004452_110 Hb_004452_110 Hb_001511_240--Hb_004452_110 Hb_029904_020 Hb_029904_020 Hb_000172_540--Hb_029904_020 Hb_001021_220 Hb_001021_220 Hb_000172_540--Hb_001021_220 Hb_003104_040 Hb_003104_040 Hb_000172_540--Hb_003104_040 Hb_029866_100 Hb_029866_100 Hb_000172_540--Hb_029866_100 Hb_000983_160 Hb_000983_160 Hb_000172_540--Hb_000983_160 Hb_003398_100 Hb_003398_100 Hb_000172_540--Hb_003398_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
93.4784 19.2525 29.8294 33.0474 15.7328 40.6365
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
48.4948 16.6096 18.27 43.1146 43.6477

CAGE analysis