Hb_000692_090

Information

Type -
Description -
Location Contig692: 90915-94318
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID GO:0005622
description probable nucleoredoxin 2 isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000692_090 0.0 - - -
2 Hb_004048_080 0.1069922688 - - hypothetical protein POPTR_0001s40360g [Populus trichocarpa]
3 Hb_082402_020 0.1097410234 - - PREDICTED: aluminum-activated malate transporter 8-like [Jatropha curcas]
4 Hb_002890_170 0.1115021719 transcription factor TF Family: zf-HD PREDICTED: zinc-finger homeodomain protein 4-like [Populus euphratica]
5 Hb_002014_140 0.1126781906 transcription factor TF Family: M-type mads box protein, putative [Ricinus communis]
6 Hb_000334_290 0.115177391 - - monovalent cation:proton antiporter, putative [Ricinus communis]
7 Hb_006901_010 0.1162968654 - - hypothetical protein JCGZ_20722 [Jatropha curcas]
8 Hb_000254_020 0.1170646712 - - hypothetical protein CISIN_1g007892mg [Citrus sinensis]
9 Hb_003038_060 0.1185297084 - - hypothetical protein POPTR_0007s13050g [Populus trichocarpa]
10 Hb_001862_040 0.119378491 - - heat shock protein 70 (HSP70)-interacting protein, putative [Ricinus communis]
11 Hb_002893_200 0.1215707798 - - aldehyde dehydrogenase, putative [Ricinus communis]
12 Hb_003747_090 0.1220431309 - - PREDICTED: glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic isoform X2 [Jatropha curcas]
13 Hb_005375_090 0.1232131226 - - PREDICTED: protein CURVATURE THYLAKOID 1B, chloroplastic [Jatropha curcas]
14 Hb_000640_090 0.1247279275 - - PREDICTED: calvin cycle protein CP12-2, chloroplastic-like [Jatropha curcas]
15 Hb_000985_150 0.1247833947 - - PREDICTED: subtilisin-like protease SBT5.3 [Jatropha curcas]
16 Hb_001279_380 0.1260344473 - - PREDICTED: uncharacterized protein LOC105115824 isoform X1 [Populus euphratica]
17 Hb_000948_240 0.1261130874 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000482_170 0.1261559593 transcription factor TF Family: C2C2-GATA GATA nirate-inducible carbon-metabolism involved protein [Populus nigra x Populus x canadensis]
19 Hb_107748_010 0.1262310991 - - PREDICTED: 7-deoxyloganetic acid glucosyltransferase-like isoform X2 [Jatropha curcas]
20 Hb_002400_200 0.1279179896 - - 14 kDa proline-rich protein DC2.15 precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_000692_090 Hb_000692_090 Hb_004048_080 Hb_004048_080 Hb_000692_090--Hb_004048_080 Hb_082402_020 Hb_082402_020 Hb_000692_090--Hb_082402_020 Hb_002890_170 Hb_002890_170 Hb_000692_090--Hb_002890_170 Hb_002014_140 Hb_002014_140 Hb_000692_090--Hb_002014_140 Hb_000334_290 Hb_000334_290 Hb_000692_090--Hb_000334_290 Hb_006901_010 Hb_006901_010 Hb_000692_090--Hb_006901_010 Hb_001862_040 Hb_001862_040 Hb_004048_080--Hb_001862_040 Hb_000948_240 Hb_000948_240 Hb_004048_080--Hb_000948_240 Hb_003032_080 Hb_003032_080 Hb_004048_080--Hb_003032_080 Hb_000703_340 Hb_000703_340 Hb_004048_080--Hb_000703_340 Hb_002592_040 Hb_002592_040 Hb_004048_080--Hb_002592_040 Hb_002014_150 Hb_002014_150 Hb_004048_080--Hb_002014_150 Hb_082402_020--Hb_002890_170 Hb_082402_020--Hb_001862_040 Hb_002400_200 Hb_002400_200 Hb_082402_020--Hb_002400_200 Hb_003747_090 Hb_003747_090 Hb_082402_020--Hb_003747_090 Hb_005375_090 Hb_005375_090 Hb_082402_020--Hb_005375_090 Hb_082402_020--Hb_000334_290 Hb_002890_170--Hb_002400_200 Hb_002890_170--Hb_003747_090 Hb_002890_170--Hb_005375_090 Hb_004129_170 Hb_004129_170 Hb_002890_170--Hb_004129_170 Hb_153106_010 Hb_153106_010 Hb_002890_170--Hb_153106_010 Hb_002014_140--Hb_006901_010 Hb_002893_200 Hb_002893_200 Hb_002014_140--Hb_002893_200 Hb_001279_380 Hb_001279_380 Hb_002014_140--Hb_001279_380 Hb_002014_140--Hb_000334_290 Hb_000139_010 Hb_000139_010 Hb_002014_140--Hb_000139_010 Hb_000482_170 Hb_000482_170 Hb_002014_140--Hb_000482_170 Hb_000985_150 Hb_000985_150 Hb_000334_290--Hb_000985_150 Hb_000334_290--Hb_006901_010 Hb_000334_290--Hb_002893_200 Hb_004525_010 Hb_004525_010 Hb_000334_290--Hb_004525_010 Hb_006901_010--Hb_000482_170 Hb_000083_020 Hb_000083_020 Hb_006901_010--Hb_000083_020 Hb_006901_010--Hb_002893_200 Hb_005605_010 Hb_005605_010 Hb_006901_010--Hb_005605_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.179061 0.0388367 0.0128166 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.336416

CAGE analysis