Hb_000139_010

Information

Type -
Description -
Location Contig139: 3584-4048
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID GO:0005507
description primary amine oxidase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000139_010 0.0 - - -
2 Hb_097940_010 0.0091123741 - - pollen protein Ole E I-like protein [Medicago truncatula]
3 Hb_001279_380 0.0124180835 - - PREDICTED: uncharacterized protein LOC105115824 isoform X1 [Populus euphratica]
4 Hb_007559_020 0.0191403514 - - peptidylprolyl isomerase, putative [Ricinus communis]
5 Hb_027403_010 0.0251322576 - - P66 protein [Hevea brasiliensis]
6 Hb_008566_060 0.0357752553 - - conserved hypothetical protein [Ricinus communis]
7 Hb_002893_200 0.0486004358 - - aldehyde dehydrogenase, putative [Ricinus communis]
8 Hb_185830_050 0.051771447 - - PREDICTED: probable galactinol--sucrose galactosyltransferase 2 [Jatropha curcas]
9 Hb_002014_140 0.052780936 transcription factor TF Family: M-type mads box protein, putative [Ricinus communis]
10 Hb_000640_090 0.0540063934 - - PREDICTED: calvin cycle protein CP12-2, chloroplastic-like [Jatropha curcas]
11 Hb_004611_010 0.0570407793 - - Blue copper protein precursor, putative [Ricinus communis]
12 Hb_003337_080 0.0622049981 - - PREDICTED: probable esterase KAI2 [Jatropha curcas]
13 Hb_000825_010 0.0622649066 - - PREDICTED: trans-cinnamate 4-monooxygenase [Jatropha curcas]
14 Hb_001104_080 0.0649446462 - - peroxiredoxin, putative [Ricinus communis]
15 Hb_005605_020 0.0654017324 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase EFR [Jatropha curcas]
16 Hb_006901_010 0.0654386925 - - hypothetical protein JCGZ_20722 [Jatropha curcas]
17 Hb_008725_280 0.06644243 transcription factor TF Family: MYB hypothetical protein POPTR_0002s19920g [Populus trichocarpa]
18 Hb_000245_090 0.0699296004 - - PREDICTED: uncharacterized protein LOC105631554 [Jatropha curcas]
19 Hb_107748_010 0.0704483491 - - PREDICTED: 7-deoxyloganetic acid glucosyltransferase-like isoform X2 [Jatropha curcas]
20 Hb_000805_080 0.0707832862 - - PREDICTED: abscisic acid 8'-hydroxylase 2 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_000139_010 Hb_000139_010 Hb_097940_010 Hb_097940_010 Hb_000139_010--Hb_097940_010 Hb_001279_380 Hb_001279_380 Hb_000139_010--Hb_001279_380 Hb_007559_020 Hb_007559_020 Hb_000139_010--Hb_007559_020 Hb_027403_010 Hb_027403_010 Hb_000139_010--Hb_027403_010 Hb_008566_060 Hb_008566_060 Hb_000139_010--Hb_008566_060 Hb_002893_200 Hb_002893_200 Hb_000139_010--Hb_002893_200 Hb_097940_010--Hb_007559_020 Hb_097940_010--Hb_001279_380 Hb_097940_010--Hb_027403_010 Hb_097940_010--Hb_008566_060 Hb_097940_010--Hb_002893_200 Hb_001279_380--Hb_007559_020 Hb_001279_380--Hb_008566_060 Hb_001279_380--Hb_027403_010 Hb_001279_380--Hb_002893_200 Hb_007559_020--Hb_027403_010 Hb_000825_010 Hb_000825_010 Hb_007559_020--Hb_000825_010 Hb_007559_020--Hb_008566_060 Hb_004611_010 Hb_004611_010 Hb_027403_010--Hb_004611_010 Hb_027403_010--Hb_008566_060 Hb_185830_050 Hb_185830_050 Hb_008566_060--Hb_185830_050 Hb_008566_060--Hb_002893_200 Hb_002014_140 Hb_002014_140 Hb_002893_200--Hb_002014_140 Hb_000640_090 Hb_000640_090 Hb_002893_200--Hb_000640_090 Hb_107748_010 Hb_107748_010 Hb_002893_200--Hb_107748_010 Hb_006901_010 Hb_006901_010 Hb_002893_200--Hb_006901_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.616619 0.092288 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 1.5318

CAGE analysis