Hb_000648_150

Information

Type -
Description -
Location Contig648: 160075-160701
Sequence    

Annotation

kegg
ID mus:103994751
description L-type lectin-domain containing receptor kinase IX.1-like
nr
ID XP_010419123.1
description PREDICTED: putative L-type lectin-domain containing receptor kinase V.1 [Camelina sativa]
swissprot
ID -
description -
trembl
ID K4CRM3
description Uncharacterized protein OS=Solanum lycopersicum GN=Solyc09g011980.1 PE=4 SV=1
Gene Ontology
ID GO:0004674
description l-type lectin-domain containing receptor kinase -like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000648_150 0.0 - - PREDICTED: putative L-type lectin-domain containing receptor kinase V.1 [Camelina sativa]
2 Hb_159308_010 0.1015505205 - - ribosomal protein S4 [Cercidiphyllum japonicum]
3 Hb_000627_200 0.1129610686 - - NADH dehydrogenase subunit I [Hevea brasiliensis]
4 Hb_115031_010 0.1135494475 - - photosystem II P680 chlorophyll A apoprotein, partial (chloroplast) [Oenothera grandiflora]
5 Hb_007645_060 0.1139808905 - - cytochrome f [Hevea brasiliensis]
6 Hb_182972_020 0.1154495517 - - cytochrome b6 [Gossypium barbadense]
7 Hb_145745_030 0.1184398968 - - BnaC09g26890D [Brassica napus]
8 Hb_149598_010 0.1190789628 - - NAD(P)H-quinone oxidoreductase subunit 6 [Medicago truncatula]
9 Hb_001338_170 0.1201662901 - - NADH dehydrogenase subunit 4 [Hevea brasiliensis]
10 Hb_007645_050 0.1279908499 - - acetyl-CoA carboxylase beta subunit [Hevea brasiliensis]
11 Hb_088080_010 0.1324715471 - - photosystem I P700 chlorophyll a apoprotein A1 [Matelea biflora]
12 Hb_001338_080 0.1329149754 - - NADH-plastoquinone oxidoreductase subunit 2 (chloroplast) [Tamarindus indica]
13 Hb_026188_010 0.1341700063 - - PREDICTED: tropinone reductase homolog [Jatropha curcas]
14 Hb_007595_030 0.1344777255 - - psbA gene product (chloroplast) [Silene noctiflora]
15 Hb_000938_050 0.1365663913 - - hypothetical protein JCGZ_09640 [Jatropha curcas]
16 Hb_001645_020 0.1370864934 - - NAD(P)H-quinone oxidoreductase subunit H [Medicago truncatula]
17 Hb_145745_010 0.1385273951 - - BnaUnng00830D [Brassica napus]
18 Hb_001674_050 0.138854442 - - cytochrome b6 (chloroplast) [Apios americana]
19 Hb_003963_030 0.1406434241 - - psbB [Jatropha curcas]
20 Hb_126973_010 0.141082834 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g34110 [Vitis vinifera]

Gene co-expression network

sample Hb_000648_150 Hb_000648_150 Hb_159308_010 Hb_159308_010 Hb_000648_150--Hb_159308_010 Hb_000627_200 Hb_000627_200 Hb_000648_150--Hb_000627_200 Hb_115031_010 Hb_115031_010 Hb_000648_150--Hb_115031_010 Hb_007645_060 Hb_007645_060 Hb_000648_150--Hb_007645_060 Hb_182972_020 Hb_182972_020 Hb_000648_150--Hb_182972_020 Hb_145745_030 Hb_145745_030 Hb_000648_150--Hb_145745_030 Hb_088080_010 Hb_088080_010 Hb_159308_010--Hb_088080_010 Hb_007595_030 Hb_007595_030 Hb_159308_010--Hb_007595_030 Hb_159308_010--Hb_007645_060 Hb_007645_050 Hb_007645_050 Hb_159308_010--Hb_007645_050 Hb_006040_090 Hb_006040_090 Hb_159308_010--Hb_006040_090 Hb_149598_010 Hb_149598_010 Hb_159308_010--Hb_149598_010 Hb_000627_200--Hb_182972_020 Hb_000627_200--Hb_007645_060 Hb_001645_020 Hb_001645_020 Hb_000627_200--Hb_001645_020 Hb_001338_170 Hb_001338_170 Hb_000627_200--Hb_001338_170 Hb_051924_010 Hb_051924_010 Hb_000627_200--Hb_051924_010 Hb_003693_030 Hb_003693_030 Hb_000627_200--Hb_003693_030 Hb_106692_020 Hb_106692_020 Hb_115031_010--Hb_106692_020 Hb_001674_050 Hb_001674_050 Hb_115031_010--Hb_001674_050 Hb_115031_010--Hb_182972_020 Hb_115031_010--Hb_001645_020 Hb_141708_010 Hb_141708_010 Hb_115031_010--Hb_141708_010 Hb_007645_060--Hb_007645_050 Hb_007645_060--Hb_182972_020 Hb_007645_060--Hb_149598_010 Hb_003963_030 Hb_003963_030 Hb_007645_060--Hb_003963_030 Hb_007645_060--Hb_001338_170 Hb_182972_020--Hb_001645_020 Hb_151890_020 Hb_151890_020 Hb_182972_020--Hb_151890_020 Hb_182972_020--Hb_051924_010 Hb_182972_020--Hb_007645_050 Hb_003693_040 Hb_003693_040 Hb_145745_030--Hb_003693_040 Hb_003688_030 Hb_003688_030 Hb_145745_030--Hb_003688_030 Hb_126973_010 Hb_126973_010 Hb_145745_030--Hb_126973_010 Hb_145745_030--Hb_007645_050 Hb_145745_030--Hb_003963_030 Hb_002835_420 Hb_002835_420 Hb_145745_030--Hb_002835_420
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.202279 0.0959623 0 0.130931
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0327978 3.71042

CAGE analysis