Hb_000432_070

Information

Type -
Description -
Location Contig432: 61485-63275
Sequence    

Annotation

kegg
ID cam:101509306
description enzymatic polyprotein-like
nr
ID XP_012066591.1
description PREDICTED: uncharacterized protein LOC105629587 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID W9QD67
description Uncharacterized protein OS=Morus notabilis GN=L484_012687 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000432_070 0.0 - - PREDICTED: uncharacterized protein LOC105629587 [Jatropha curcas]
2 Hb_094917_010 0.2308191562 - - -
3 Hb_001570_010 0.2329049459 - - -
4 Hb_000100_110 0.2493260281 - - -
5 Hb_002447_100 0.2723365854 - - hypothetical protein POPTR_0009s06260g [Populus trichocarpa]
6 Hb_002973_120 0.2737407675 - - Uncharacterized protein TCM_024268 [Theobroma cacao]
7 Hb_004662_020 0.2745900523 - - 40S ribosomal protein S9, putative [Ricinus communis]
8 Hb_003799_060 0.2746779823 - - hypothetical protein POPTR_0005s22800g [Populus trichocarpa]
9 Hb_000060_070 0.2753371816 - - hypothetical protein EUTSA_v10023188mg, partial [Eutrema salsugineum]
10 Hb_003938_110 0.283016968 - - polyprotein [Ananas comosus]
11 Hb_006405_040 0.286269684 - - hypothetical protein VITISV_026680 [Vitis vinifera]
12 Hb_155423_010 0.2867493864 - - -
13 Hb_000473_160 0.2884128432 - - PREDICTED: uncharacterized protein LOC102596609 [Solanum tuberosum]
14 Hb_001793_030 0.2895310283 - - Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Theobroma cacao]
15 Hb_001542_010 0.2926273347 - - hypothetical protein, partial [Pseudomonas fluorescens]
16 Hb_007590_030 0.2952292103 - - PREDICTED: iridoid synthase [Jatropha curcas]
17 Hb_112791_030 0.2957513487 - - Uncharacterized protein TCM_027940 [Theobroma cacao]
18 Hb_145080_010 0.298190314 - - PREDICTED: uncharacterized protein LOC105643750 [Jatropha curcas]
19 Hb_011358_010 0.2986316653 - - -
20 Hb_000803_230 0.2987573071 - - PREDICTED: uncharacterized protein LOC104106381 [Nicotiana tomentosiformis]

Gene co-expression network

sample Hb_000432_070 Hb_000432_070 Hb_094917_010 Hb_094917_010 Hb_000432_070--Hb_094917_010 Hb_001570_010 Hb_001570_010 Hb_000432_070--Hb_001570_010 Hb_000100_110 Hb_000100_110 Hb_000432_070--Hb_000100_110 Hb_002447_100 Hb_002447_100 Hb_000432_070--Hb_002447_100 Hb_002973_120 Hb_002973_120 Hb_000432_070--Hb_002973_120 Hb_004662_020 Hb_004662_020 Hb_000432_070--Hb_004662_020 Hb_094917_010--Hb_001570_010 Hb_003406_020 Hb_003406_020 Hb_094917_010--Hb_003406_020 Hb_094917_010--Hb_002447_100 Hb_155423_010 Hb_155423_010 Hb_094917_010--Hb_155423_010 Hb_007590_030 Hb_007590_030 Hb_094917_010--Hb_007590_030 Hb_151870_010 Hb_151870_010 Hb_094917_010--Hb_151870_010 Hb_001570_010--Hb_003406_020 Hb_001570_010--Hb_002447_100 Hb_001570_010--Hb_155423_010 Hb_000567_270 Hb_000567_270 Hb_001570_010--Hb_000567_270 Hb_034197_020 Hb_034197_020 Hb_001570_010--Hb_034197_020 Hb_001221_350 Hb_001221_350 Hb_000100_110--Hb_001221_350 Hb_006111_040 Hb_006111_040 Hb_000100_110--Hb_006111_040 Hb_001793_030 Hb_001793_030 Hb_000100_110--Hb_001793_030 Hb_009851_090 Hb_009851_090 Hb_000100_110--Hb_009851_090 Hb_127552_050 Hb_127552_050 Hb_000100_110--Hb_127552_050 Hb_002631_270 Hb_002631_270 Hb_000100_110--Hb_002631_270 Hb_002447_100--Hb_155423_010 Hb_002447_100--Hb_007590_030 Hb_112791_030 Hb_112791_030 Hb_002447_100--Hb_112791_030 Hb_001542_010 Hb_001542_010 Hb_002447_100--Hb_001542_010 Hb_145080_010 Hb_145080_010 Hb_002447_100--Hb_145080_010 Hb_011358_010 Hb_011358_010 Hb_002447_100--Hb_011358_010 Hb_001793_040 Hb_001793_040 Hb_002973_120--Hb_001793_040 Hb_001385_070 Hb_001385_070 Hb_002973_120--Hb_001385_070 Hb_170878_020 Hb_170878_020 Hb_002973_120--Hb_170878_020 Hb_008055_030 Hb_008055_030 Hb_002973_120--Hb_008055_030 Hb_002973_120--Hb_127552_050 Hb_000968_070 Hb_000968_070 Hb_002973_120--Hb_000968_070 Hb_001124_200 Hb_001124_200 Hb_004662_020--Hb_001124_200 Hb_011476_010 Hb_011476_010 Hb_004662_020--Hb_011476_010 Hb_003186_050 Hb_003186_050 Hb_004662_020--Hb_003186_050 Hb_004274_010 Hb_004274_010 Hb_004662_020--Hb_004274_010 Hb_167457_010 Hb_167457_010 Hb_004662_020--Hb_167457_010 Hb_001452_150 Hb_001452_150 Hb_004662_020--Hb_001452_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0220363 0 0.0308493 0.0133385 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.023855 0 0.028556 0.149876

CAGE analysis