Hb_000317_060

Information

Type -
Description -
Location Contig317: 46656-49264
Sequence    

Annotation

kegg
ID rcu:RCOM_1176290
description micronuclear linker histone polyprotein, putative
nr
ID XP_012088421.1
description PREDICTED: uncharacterized protein LOC105647051 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JJN7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25843 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000317_060 0.0 - - PREDICTED: uncharacterized protein LOC105647051 [Jatropha curcas]
2 Hb_001953_150 0.0934815112 - - PREDICTED: protein DEK isoform X2 [Jatropha curcas]
3 Hb_005054_190 0.1065789632 - - PREDICTED: uncharacterized protein LOC105646630 isoform X1 [Jatropha curcas]
4 Hb_080147_040 0.106756328 - - hypothetical protein JCGZ_07266 [Jatropha curcas]
5 Hb_000922_140 0.106939306 - - PREDICTED: peroxisomal membrane protein PEX14 [Jatropha curcas]
6 Hb_003430_030 0.1090919335 - - PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31 [Jatropha curcas]
7 Hb_011918_050 0.110135088 - - -
8 Hb_003529_130 0.1118894025 - - PREDICTED: ribosome biogenesis protein BOP1 homolog isoform X1 [Jatropha curcas]
9 Hb_001231_030 0.114189841 - - PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER-like [Jatropha curcas]
10 Hb_002571_030 0.1178191788 - - PREDICTED: microfibrillar-associated protein 1-like [Prunus mume]
11 Hb_000661_020 0.1184543432 - - BnaC08g27190D [Brassica napus]
12 Hb_000023_320 0.1214839561 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000139_230 0.1216984432 transcription factor TF Family: SNF2 PREDICTED: probable ATP-dependent DNA helicase CHR12 [Jatropha curcas]
14 Hb_005260_040 0.1232556108 - - PREDICTED: uncharacterized protein LOC105633768 isoform X1 [Jatropha curcas]
15 Hb_002997_160 0.1244159386 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 5 isoform X2 [Jatropha curcas]
16 Hb_009620_030 0.1257331101 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP59 [Jatropha curcas]
17 Hb_003929_140 0.1259154332 - - DNA binding protein, putative [Ricinus communis]
18 Hb_000184_150 0.1260540728 - - PREDICTED: U-box domain-containing protein 15 [Jatropha curcas]
19 Hb_000327_080 0.1264500695 - - PREDICTED: regulator of nonsense transcripts UPF2 [Jatropha curcas]
20 Hb_000753_100 0.1268344938 transcription factor TF Family: PHD PREDICTED: uncharacterized protein LOC105640677 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000317_060 Hb_000317_060 Hb_001953_150 Hb_001953_150 Hb_000317_060--Hb_001953_150 Hb_005054_190 Hb_005054_190 Hb_000317_060--Hb_005054_190 Hb_080147_040 Hb_080147_040 Hb_000317_060--Hb_080147_040 Hb_000922_140 Hb_000922_140 Hb_000317_060--Hb_000922_140 Hb_003430_030 Hb_003430_030 Hb_000317_060--Hb_003430_030 Hb_011918_050 Hb_011918_050 Hb_000317_060--Hb_011918_050 Hb_001953_150--Hb_000922_140 Hb_005332_020 Hb_005332_020 Hb_001953_150--Hb_005332_020 Hb_001953_150--Hb_080147_040 Hb_001799_050 Hb_001799_050 Hb_001953_150--Hb_001799_050 Hb_001143_250 Hb_001143_250 Hb_001953_150--Hb_001143_250 Hb_000270_460 Hb_000270_460 Hb_001953_150--Hb_000270_460 Hb_005054_190--Hb_003430_030 Hb_000024_120 Hb_000024_120 Hb_005054_190--Hb_000024_120 Hb_000363_280 Hb_000363_280 Hb_005054_190--Hb_000363_280 Hb_005610_080 Hb_005610_080 Hb_005054_190--Hb_005610_080 Hb_000345_490 Hb_000345_490 Hb_005054_190--Hb_000345_490 Hb_005054_190--Hb_011918_050 Hb_000300_360 Hb_000300_360 Hb_080147_040--Hb_000300_360 Hb_009620_030 Hb_009620_030 Hb_080147_040--Hb_009620_030 Hb_006452_160 Hb_006452_160 Hb_080147_040--Hb_006452_160 Hb_005188_060 Hb_005188_060 Hb_080147_040--Hb_005188_060 Hb_140049_020 Hb_140049_020 Hb_080147_040--Hb_140049_020 Hb_000922_140--Hb_005332_020 Hb_006658_040 Hb_006658_040 Hb_000922_140--Hb_006658_040 Hb_004429_160 Hb_004429_160 Hb_000922_140--Hb_004429_160 Hb_001427_190 Hb_001427_190 Hb_000922_140--Hb_001427_190 Hb_001307_080 Hb_001307_080 Hb_000922_140--Hb_001307_080 Hb_003430_030--Hb_000363_280 Hb_003430_030--Hb_005610_080 Hb_003430_030--Hb_000024_120 Hb_000120_420 Hb_000120_420 Hb_003430_030--Hb_000120_420 Hb_003430_030--Hb_000345_490 Hb_016734_090 Hb_016734_090 Hb_011918_050--Hb_016734_090 Hb_002739_130 Hb_002739_130 Hb_011918_050--Hb_002739_130 Hb_001269_200 Hb_001269_200 Hb_011918_050--Hb_001269_200 Hb_000023_320 Hb_000023_320 Hb_011918_050--Hb_000023_320 Hb_005288_080 Hb_005288_080 Hb_011918_050--Hb_005288_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.537989 0.410564 0.313412 0.144408 0.300969 0.312849
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0982279 0.0579647 0.073123 0.261555 0.203691

CAGE analysis