Hb_186844_010

Information

Type -
Description -
Location Contig186844: 4-1041
Sequence    

Annotation

kegg
ID rcu:RCOM_1113060
description leucine-rich repeat receptor protein kinase exs precursor, putative (EC:1.3.1.74)
nr
ID XP_002531725.1
description leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
swissprot
ID Q8S7M7
description Plant intracellular Ras-group-related LRR protein 5 OS=Oryza sativa subsp. japonica GN=IRL5 PE=2 SV=1
trembl
ID B9T0F6
description Leucine-rich repeat receptor protein kinase exs, putative OS=Ricinus communis GN=RCOM_1113060 PE=4 SV=1
Gene Ontology
ID GO:0005515
description disease resistance family protein lrr family

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_186844_010 0.0 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
2 Hb_007718_030 0.090944192 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
3 Hb_096224_050 0.0920336774 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g31250 [Jatropha curcas]
4 Hb_046739_010 0.0999967738 - - PREDICTED: probable serine/threonine-protein kinase At1g18390 isoform X1 [Jatropha curcas]
5 Hb_033363_030 0.101515922 - - PREDICTED: serine/threonine-protein kinase STN7, chloroplastic [Jatropha curcas]
6 Hb_002407_090 0.1028746741 - - hypothetical protein JCGZ_00747 [Jatropha curcas]
7 Hb_000027_110 0.1034981172 - - wall-associated kinase, putative [Ricinus communis]
8 Hb_119600_030 0.1104407046 - - PREDICTED: uncharacterized protein LOC105635187 [Jatropha curcas]
9 Hb_001699_140 0.1127640163 - - PREDICTED: ferredoxin--NADP reductase, leaf isozyme, chloroplastic [Jatropha curcas]
10 Hb_000270_640 0.1133646533 - - hypothetical protein POPTR_0012s07880g [Populus trichocarpa]
11 Hb_000644_010 0.113584248 - - PREDICTED: putative disease resistance protein RGA1 isoform X2 [Jatropha curcas]
12 Hb_000270_090 0.1150491153 - - nitrate transporter, putative [Ricinus communis]
13 Hb_011028_030 0.1164816231 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000116_090 0.1166668354 - - catalase [Hevea brasiliensis]
15 Hb_025557_060 0.117067748 transcription factor TF Family: MYB Myb-related protein 306, putative isoform 1 [Theobroma cacao]
16 Hb_001321_010 0.118850141 - - HIGH-CHLOROPHYLL-FLUORESCENCE 101 family protein [Populus trichocarpa]
17 Hb_011104_020 0.1208205504 - - PREDICTED: ABC transporter B family member 2-like [Jatropha curcas]
18 Hb_019863_050 0.1211395023 - - PREDICTED: uncharacterized protein LOC103343426 [Prunus mume]
19 Hb_003373_050 0.1215889445 - - receptor protein kinase zmpk1, putative [Ricinus communis]
20 Hb_000373_010 0.1220039594 - - ATP binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_186844_010 Hb_186844_010 Hb_007718_030 Hb_007718_030 Hb_186844_010--Hb_007718_030 Hb_096224_050 Hb_096224_050 Hb_186844_010--Hb_096224_050 Hb_046739_010 Hb_046739_010 Hb_186844_010--Hb_046739_010 Hb_033363_030 Hb_033363_030 Hb_186844_010--Hb_033363_030 Hb_002407_090 Hb_002407_090 Hb_186844_010--Hb_002407_090 Hb_000027_110 Hb_000027_110 Hb_186844_010--Hb_000027_110 Hb_007718_030--Hb_002407_090 Hb_025557_060 Hb_025557_060 Hb_007718_030--Hb_025557_060 Hb_001321_010 Hb_001321_010 Hb_007718_030--Hb_001321_010 Hb_011104_020 Hb_011104_020 Hb_007718_030--Hb_011104_020 Hb_007718_030--Hb_096224_050 Hb_000270_090 Hb_000270_090 Hb_007718_030--Hb_000270_090 Hb_007904_110 Hb_007904_110 Hb_096224_050--Hb_007904_110 Hb_004979_070 Hb_004979_070 Hb_096224_050--Hb_004979_070 Hb_000644_010 Hb_000644_010 Hb_096224_050--Hb_000644_010 Hb_004979_080 Hb_004979_080 Hb_096224_050--Hb_004979_080 Hb_096224_050--Hb_000027_110 Hb_096224_050--Hb_033363_030 Hb_000031_320 Hb_000031_320 Hb_046739_010--Hb_000031_320 Hb_046739_010--Hb_002407_090 Hb_011028_030 Hb_011028_030 Hb_046739_010--Hb_011028_030 Hb_046739_010--Hb_033363_030 Hb_002010_030 Hb_002010_030 Hb_046739_010--Hb_002010_030 Hb_046739_010--Hb_096224_050 Hb_033363_030--Hb_004979_080 Hb_033363_030--Hb_000027_110 Hb_000668_180 Hb_000668_180 Hb_033363_030--Hb_000668_180 Hb_033363_030--Hb_011028_030 Hb_000608_290 Hb_000608_290 Hb_002407_090--Hb_000608_290 Hb_002407_090--Hb_011028_030 Hb_002407_090--Hb_011104_020 Hb_002407_090--Hb_000270_090 Hb_000373_010 Hb_000373_010 Hb_002407_090--Hb_000373_010 Hb_000027_110--Hb_000644_010 Hb_000027_110--Hb_000668_180 Hb_000116_090 Hb_000116_090 Hb_000027_110--Hb_000116_090 Hb_005305_070 Hb_005305_070 Hb_000027_110--Hb_005305_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0211395 0.951292 2.18046 0.921684 0.082033 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.183491 3.98098

CAGE analysis