Hb_002407_090

Information

Type -
Description -
Location Contig2407: 95586-96253
Sequence    

Annotation

kegg
ID pop:POPTR_0001s43900g
description hypothetical protein
nr
ID KDP38990.1
description hypothetical protein JCGZ_00747 [Jatropha curcas]
swissprot
ID Q8GWJ7
description Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2
trembl
ID A0A067L3B2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00747 PE=4 SV=1
Gene Ontology
ID GO:0004674
description g-type lectin s-receptor-like serine threonine-protein kinase at4g27290

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002407_090 0.0 - - hypothetical protein JCGZ_00747 [Jatropha curcas]
2 Hb_046739_010 0.0620704054 - - PREDICTED: probable serine/threonine-protein kinase At1g18390 isoform X1 [Jatropha curcas]
3 Hb_000608_290 0.0719841551 - - thioredoxin f-type, putative [Ricinus communis]
4 Hb_011028_030 0.0726237899 - - conserved hypothetical protein [Ricinus communis]
5 Hb_011104_020 0.0743672316 - - PREDICTED: ABC transporter B family member 2-like [Jatropha curcas]
6 Hb_000270_090 0.0758247818 - - nitrate transporter, putative [Ricinus communis]
7 Hb_000373_010 0.07681815 - - ATP binding protein, putative [Ricinus communis]
8 Hb_001321_010 0.0769744658 - - HIGH-CHLOROPHYLL-FLUORESCENCE 101 family protein [Populus trichocarpa]
9 Hb_096224_050 0.0818245168 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g31250 [Jatropha curcas]
10 Hb_007718_030 0.0833113535 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
11 Hb_000031_320 0.0851498495 - - unnamed protein product [Vitis vinifera]
12 Hb_025557_060 0.094565519 transcription factor TF Family: MYB Myb-related protein 306, putative isoform 1 [Theobroma cacao]
13 Hb_001051_010 0.0946448201 - - PREDICTED: putative cyclic nucleotide-gated ion channel 15 [Jatropha curcas]
14 Hb_018591_020 0.0976446832 - - Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplast precursor, putative [Ricinus communis]
15 Hb_002155_020 0.0976546756 - - PREDICTED: probable WRKY transcription factor 65 [Jatropha curcas]
16 Hb_004017_030 0.097907843 - - PREDICTED: 2-hydroxyisoflavanone dehydratase-like [Jatropha curcas]
17 Hb_010136_010 0.0991498682 - - Putative receptor-like protein kinase [Glycine soja]
18 Hb_001248_070 0.1005963632 - - PREDICTED: probable polyamine transporter At3g19553 [Jatropha curcas]
19 Hb_033363_030 0.102579025 - - PREDICTED: serine/threonine-protein kinase STN7, chloroplastic [Jatropha curcas]
20 Hb_186844_010 0.1028746741 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_002407_090 Hb_002407_090 Hb_046739_010 Hb_046739_010 Hb_002407_090--Hb_046739_010 Hb_000608_290 Hb_000608_290 Hb_002407_090--Hb_000608_290 Hb_011028_030 Hb_011028_030 Hb_002407_090--Hb_011028_030 Hb_011104_020 Hb_011104_020 Hb_002407_090--Hb_011104_020 Hb_000270_090 Hb_000270_090 Hb_002407_090--Hb_000270_090 Hb_000373_010 Hb_000373_010 Hb_002407_090--Hb_000373_010 Hb_000031_320 Hb_000031_320 Hb_046739_010--Hb_000031_320 Hb_046739_010--Hb_011028_030 Hb_033363_030 Hb_033363_030 Hb_046739_010--Hb_033363_030 Hb_002010_030 Hb_002010_030 Hb_046739_010--Hb_002010_030 Hb_096224_050 Hb_096224_050 Hb_046739_010--Hb_096224_050 Hb_001051_010 Hb_001051_010 Hb_000608_290--Hb_001051_010 Hb_001248_070 Hb_001248_070 Hb_000608_290--Hb_001248_070 Hb_018591_020 Hb_018591_020 Hb_000608_290--Hb_018591_020 Hb_002073_150 Hb_002073_150 Hb_000608_290--Hb_002073_150 Hb_000608_290--Hb_011104_020 Hb_002155_020 Hb_002155_020 Hb_011028_030--Hb_002155_020 Hb_011028_030--Hb_000373_010 Hb_011028_030--Hb_000031_320 Hb_000644_010 Hb_000644_010 Hb_011028_030--Hb_000644_010 Hb_011104_020--Hb_002073_150 Hb_000483_430 Hb_000483_430 Hb_011104_020--Hb_000483_430 Hb_001321_010 Hb_001321_010 Hb_011104_020--Hb_001321_010 Hb_011104_020--Hb_000270_090 Hb_004994_030 Hb_004994_030 Hb_011104_020--Hb_004994_030 Hb_012389_010 Hb_012389_010 Hb_011104_020--Hb_012389_010 Hb_000270_090--Hb_001321_010 Hb_000270_090--Hb_004994_030 Hb_001699_140 Hb_001699_140 Hb_000270_090--Hb_001699_140 Hb_002007_220 Hb_002007_220 Hb_000270_090--Hb_002007_220 Hb_000373_010--Hb_002155_020 Hb_000373_010--Hb_000644_010 Hb_000680_130 Hb_000680_130 Hb_000373_010--Hb_000680_130 Hb_000373_010--Hb_096224_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.669511 1.56004 0.805262 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.167213 2.27509

CAGE analysis