Hb_140049_050

Information

Type -
Description -
Location Contig140049: 28040-28825
Sequence    

Annotation

kegg
ID tcc:TCM_020657
description Non-specific lipid-transfer protein, putative isoform 1
nr
ID XP_012069925.1
description PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Jatropha curcas]
swissprot
ID Q9ZQI8
description Non-specific lipid-transfer protein-like protein At2g13820 OS=Arabidopsis thaliana GN=At2g13820 PE=1 SV=1
trembl
ID A0A067K9W5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02200 PE=4 SV=1
Gene Ontology
ID GO:0008289
description non-specific lipid-transfer protein at2g13820

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_140049_050 0.0 - - PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Jatropha curcas]
2 Hb_001565_110 0.2229570969 - - PREDICTED: putative ABC transporter B family member 8 [Jatropha curcas]
3 Hb_001433_180 0.2361562207 - - hypothetical protein JCGZ_23261 [Jatropha curcas]
4 Hb_007382_050 0.2480214614 - - PREDICTED: uncharacterized protein LOC105645009 [Jatropha curcas]
5 Hb_000645_110 0.2552045226 transcription factor TF Family: GRAS PREDICTED: DELLA protein RGL1-like [Jatropha curcas]
6 Hb_000067_010 0.2563154119 - - hypothetical protein B456_002G147500 [Gossypium raimondii]
7 Hb_010334_020 0.2612991908 - - PREDICTED: inactive protein RESTRICTED TEV MOVEMENT 1-like [Sesamum indicum]
8 Hb_138585_110 0.2662334711 - - -
9 Hb_000025_430 0.2710221497 transcription factor TF Family: SRS transcription factor, putative [Ricinus communis]
10 Hb_080147_100 0.2931026793 - - PREDICTED: putative E3 ubiquitin-protein ligase LIN [Jatropha curcas]
11 Hb_003835_040 0.2944992633 - - PREDICTED: UDP-glycosyltransferase 91A1-like [Jatropha curcas]
12 Hb_024621_030 0.2962589605 - - tetraketide alpha-pyrone reductase 2 [Jatropha curcas]
13 Hb_003073_180 0.2964185959 - - hypothetical protein JCGZ_20198 [Jatropha curcas]
14 Hb_001504_120 0.2987334011 - - -
15 Hb_105328_030 0.2999868816 - - Putative retroelement [Oryza sativa Japonica Group]
16 Hb_005725_090 0.3019202341 - - PREDICTED: phytosulfokines 3 [Cicer arietinum]
17 Hb_000796_250 0.3055334713 transcription factor TF Family: WRKY WRKY1 [Hevea brasiliensis]
18 Hb_003623_070 0.3059814073 - - ubiquitin-protein ligase, putative [Ricinus communis]
19 Hb_031862_040 0.3079214044 - - purine transporter, putative [Ricinus communis]
20 Hb_000483_110 0.3081427974 transcription factor TF Family: zf-HD Mini zinc finger 2 isoform 2, partial [Theobroma cacao]

Gene co-expression network

sample Hb_140049_050 Hb_140049_050 Hb_001565_110 Hb_001565_110 Hb_140049_050--Hb_001565_110 Hb_001433_180 Hb_001433_180 Hb_140049_050--Hb_001433_180 Hb_007382_050 Hb_007382_050 Hb_140049_050--Hb_007382_050 Hb_000645_110 Hb_000645_110 Hb_140049_050--Hb_000645_110 Hb_000067_010 Hb_000067_010 Hb_140049_050--Hb_000067_010 Hb_010334_020 Hb_010334_020 Hb_140049_050--Hb_010334_020 Hb_000260_290 Hb_000260_290 Hb_001565_110--Hb_000260_290 Hb_000025_430 Hb_000025_430 Hb_001565_110--Hb_000025_430 Hb_013766_010 Hb_013766_010 Hb_001565_110--Hb_013766_010 Hb_082182_010 Hb_082182_010 Hb_001565_110--Hb_082182_010 Hb_005439_040 Hb_005439_040 Hb_001565_110--Hb_005439_040 Hb_001433_180--Hb_007382_050 Hb_031862_040 Hb_031862_040 Hb_001433_180--Hb_031862_040 Hb_003623_070 Hb_003623_070 Hb_001433_180--Hb_003623_070 Hb_000140_410 Hb_000140_410 Hb_001433_180--Hb_000140_410 Hb_001433_180--Hb_000260_290 Hb_000796_250 Hb_000796_250 Hb_001433_180--Hb_000796_250 Hb_007382_050--Hb_003623_070 Hb_001635_050 Hb_001635_050 Hb_007382_050--Hb_001635_050 Hb_002273_080 Hb_002273_080 Hb_007382_050--Hb_002273_080 Hb_001951_030 Hb_001951_030 Hb_007382_050--Hb_001951_030 Hb_005841_080 Hb_005841_080 Hb_007382_050--Hb_005841_080 Hb_003073_180 Hb_003073_180 Hb_000645_110--Hb_003073_180 Hb_080147_100 Hb_080147_100 Hb_000645_110--Hb_080147_100 Hb_000209_110 Hb_000209_110 Hb_000645_110--Hb_000209_110 Hb_000317_360 Hb_000317_360 Hb_000645_110--Hb_000317_360 Hb_000157_130 Hb_000157_130 Hb_000645_110--Hb_000157_130 Hb_000093_150 Hb_000093_150 Hb_000067_010--Hb_000093_150 Hb_001946_030 Hb_001946_030 Hb_000067_010--Hb_001946_030 Hb_096811_010 Hb_096811_010 Hb_000067_010--Hb_096811_010 Hb_000928_040 Hb_000928_040 Hb_000067_010--Hb_000928_040 Hb_002043_010 Hb_002043_010 Hb_000067_010--Hb_002043_010 Hb_138585_110 Hb_138585_110 Hb_010334_020--Hb_138585_110 Hb_001148_030 Hb_001148_030 Hb_010334_020--Hb_001148_030 Hb_000005_250 Hb_000005_250 Hb_010334_020--Hb_000005_250 Hb_010334_020--Hb_000093_150 Hb_000645_210 Hb_000645_210 Hb_010334_020--Hb_000645_210 Hb_004462_010 Hb_004462_010 Hb_010334_020--Hb_004462_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0439146 0.224774 0 0 0 0.104874
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.101987 0.0801519 0.140044 0.526131 0

CAGE analysis