Hb_130885_010

Information

Type -
Description -
Location Contig130885: 607-1691
Sequence    

Annotation

kegg
ID mdm:103447061
description non-cyanogenic beta-glucosidase-like
nr
ID XP_012065488.1
description PREDICTED: beta-glucosidase 13-like [Jatropha curcas]
swissprot
ID P26205
description Cyanogenic beta-glucosidase (Fragment) OS=Trifolium repens GN=LI PE=1 SV=1
trembl
ID A0A067LGV0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16701 PE=3 SV=1
Gene Ontology
ID GO:0008422
description beta-glucosidase 13-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_130885_010 0.0 - - PREDICTED: beta-glucosidase 13-like [Jatropha curcas]
2 Hb_159809_080 0.1952812995 - - multidrug resistance pump, putative [Ricinus communis]
3 Hb_011849_020 0.2253043558 - - dioxygenase family protein [Populus trichocarpa]
4 Hb_179138_010 0.2292592831 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA1 [Jatropha curcas]
5 Hb_002909_110 0.2293528621 - - PREDICTED: uncharacterized protein LOC105648153 [Jatropha curcas]
6 Hb_000011_320 0.229547138 - - PREDICTED: uncharacterized protein LOC105631328 [Jatropha curcas]
7 Hb_000934_180 0.2298471319 - - hypothetical protein JCGZ_25237 [Jatropha curcas]
8 Hb_009732_040 0.2304634253 - - hypothetical protein POPTR_0006s04880g [Populus trichocarpa]
9 Hb_006153_180 0.231959544 - - PREDICTED: protein NRT1/ PTR FAMILY 6.3 isoform X1 [Jatropha curcas]
10 Hb_000163_010 0.2381770929 - - hypothetical protein JCGZ_13952 [Jatropha curcas]
11 Hb_004785_090 0.2433615218 - - hypothetical protein MIMGU_mgv1a018797mg [Erythranthe guttata]
12 Hb_039096_010 0.2439105027 - - unknown [Populus trichocarpa]
13 Hb_000011_380 0.2465976467 - - PREDICTED: LOW QUALITY PROTEIN: subtilisin-like protease SBT1.6 [Jatropha curcas]
14 Hb_008304_050 0.2468502958 - - PREDICTED: trans-cinnamate 4-monooxygenase [Jatropha curcas]
15 Hb_000127_080 0.2480098738 - - hypothetical protein POPTR_0005s21760g [Populus trichocarpa]
16 Hb_003983_010 0.2485079512 - - serine/threonine-protein kinase bri1, putative [Ricinus communis]
17 Hb_000300_420 0.2503153652 - - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, putative [Ricinus communis]
18 Hb_120357_010 0.25151283 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
19 Hb_049438_020 0.2519315768 - - PREDICTED: peroxidase 20 [Jatropha curcas]
20 Hb_000685_100 0.2543878662 - - hypothetical protein POPTR_0001s10630g [Populus trichocarpa]

Gene co-expression network

sample Hb_130885_010 Hb_130885_010 Hb_159809_080 Hb_159809_080 Hb_130885_010--Hb_159809_080 Hb_011849_020 Hb_011849_020 Hb_130885_010--Hb_011849_020 Hb_179138_010 Hb_179138_010 Hb_130885_010--Hb_179138_010 Hb_002909_110 Hb_002909_110 Hb_130885_010--Hb_002909_110 Hb_000011_320 Hb_000011_320 Hb_130885_010--Hb_000011_320 Hb_000934_180 Hb_000934_180 Hb_130885_010--Hb_000934_180 Hb_159809_080--Hb_179138_010 Hb_003983_010 Hb_003983_010 Hb_159809_080--Hb_003983_010 Hb_159809_080--Hb_000011_320 Hb_008304_050 Hb_008304_050 Hb_159809_080--Hb_008304_050 Hb_001174_020 Hb_001174_020 Hb_159809_080--Hb_001174_020 Hb_159809_080--Hb_011849_020 Hb_000163_010 Hb_000163_010 Hb_011849_020--Hb_000163_010 Hb_003913_060 Hb_003913_060 Hb_011849_020--Hb_003913_060 Hb_015978_010 Hb_015978_010 Hb_011849_020--Hb_015978_010 Hb_000254_060 Hb_000254_060 Hb_011849_020--Hb_000254_060 Hb_011849_020--Hb_179138_010 Hb_000009_430 Hb_000009_430 Hb_011849_020--Hb_000009_430 Hb_179138_010--Hb_003983_010 Hb_179138_010--Hb_001174_020 Hb_179138_010--Hb_000011_320 Hb_179138_010--Hb_008304_050 Hb_002110_290 Hb_002110_290 Hb_002909_110--Hb_002110_290 Hb_000442_120 Hb_000442_120 Hb_002909_110--Hb_000442_120 Hb_012707_010 Hb_012707_010 Hb_002909_110--Hb_012707_010 Hb_000300_420 Hb_000300_420 Hb_002909_110--Hb_000300_420 Hb_000950_030 Hb_000950_030 Hb_002909_110--Hb_000950_030 Hb_003397_020 Hb_003397_020 Hb_002909_110--Hb_003397_020 Hb_003304_090 Hb_003304_090 Hb_000011_320--Hb_003304_090 Hb_000561_040 Hb_000561_040 Hb_000011_320--Hb_000561_040 Hb_000011_320--Hb_008304_050 Hb_000705_050 Hb_000705_050 Hb_000011_320--Hb_000705_050 Hb_000389_100 Hb_000389_100 Hb_000011_320--Hb_000389_100 Hb_004893_010 Hb_004893_010 Hb_000011_320--Hb_004893_010 Hb_113945_010 Hb_113945_010 Hb_000934_180--Hb_113945_010 Hb_170861_010 Hb_170861_010 Hb_000934_180--Hb_170861_010 Hb_039096_010 Hb_039096_010 Hb_000934_180--Hb_039096_010 Hb_000106_060 Hb_000106_060 Hb_000934_180--Hb_000106_060 Hb_120357_010 Hb_120357_010 Hb_000934_180--Hb_120357_010 Hb_002876_190 Hb_002876_190 Hb_000934_180--Hb_002876_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.167085 0.318123 8.5865 0.0798398 0.422051
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.94862 5.8071 3.3887

CAGE analysis