Hb_000163_010

Information

Type -
Description -
Location Contig163: 10605-11120
Sequence    

Annotation

kegg
ID rcu:RCOM_1178680
description hypothetical protein
nr
ID KDP28181.1
description hypothetical protein JCGZ_13952 [Jatropha curcas]
swissprot
ID Q9M015
description Uncharacterized protein At5g01610 OS=Arabidopsis thaliana GN=At5g01610 PE=1 SV=1
trembl
ID A0A067JW36
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13952 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000163_010 0.0 - - hypothetical protein JCGZ_13952 [Jatropha curcas]
2 Hb_003913_060 0.0754793905 - - ATP binding protein, putative [Ricinus communis]
3 Hb_011849_020 0.0856300635 - - dioxygenase family protein [Populus trichocarpa]
4 Hb_003398_090 0.1157389973 - - PREDICTED: expansin-A4 [Jatropha curcas]
5 Hb_015978_010 0.1191216831 - - PREDICTED: probable beta-D-xylosidase 2 [Populus euphratica]
6 Hb_000318_060 0.1259520276 - - conserved hypothetical protein [Ricinus communis]
7 Hb_003177_080 0.1290426876 - - hypothetical protein L484_016032 [Morus notabilis]
8 Hb_000139_500 0.1320524607 - - PREDICTED: putative uncharacterized protein DDB_G0286901 [Prunus mume]
9 Hb_001430_090 0.1356089343 - - hypothetical protein JCGZ_05131 [Jatropha curcas]
10 Hb_002900_040 0.1373762952 - - PREDICTED: 7-deoxyloganetic acid glucosyltransferase-like [Populus euphratica]
11 Hb_085315_010 0.1548503913 - - PREDICTED: uncharacterized protein LOC105632092 [Jatropha curcas]
12 Hb_000393_030 0.1600049762 - - UDP-glucosyltransferase, putative [Ricinus communis]
13 Hb_008727_030 0.1613850882 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000934_180 0.161677187 - - hypothetical protein JCGZ_25237 [Jatropha curcas]
15 Hb_000751_060 0.1650857324 - - PREDICTED: extensin-2-like, partial [Sesamum indicum]
16 Hb_006501_100 0.1674892414 - - malic enzyme, putative [Ricinus communis]
17 Hb_000009_430 0.1683905635 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000127_080 0.1685529406 - - hypothetical protein POPTR_0005s21760g [Populus trichocarpa]
19 Hb_039096_010 0.1709686665 - - unknown [Populus trichocarpa]
20 Hb_000836_480 0.1721112192 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]

Gene co-expression network

sample Hb_000163_010 Hb_000163_010 Hb_003913_060 Hb_003913_060 Hb_000163_010--Hb_003913_060 Hb_011849_020 Hb_011849_020 Hb_000163_010--Hb_011849_020 Hb_003398_090 Hb_003398_090 Hb_000163_010--Hb_003398_090 Hb_015978_010 Hb_015978_010 Hb_000163_010--Hb_015978_010 Hb_000318_060 Hb_000318_060 Hb_000163_010--Hb_000318_060 Hb_003177_080 Hb_003177_080 Hb_000163_010--Hb_003177_080 Hb_003913_060--Hb_000318_060 Hb_003913_060--Hb_003398_090 Hb_003913_060--Hb_015978_010 Hb_000139_500 Hb_000139_500 Hb_003913_060--Hb_000139_500 Hb_003913_060--Hb_011849_020 Hb_011849_020--Hb_015978_010 Hb_000254_060 Hb_000254_060 Hb_011849_020--Hb_000254_060 Hb_179138_010 Hb_179138_010 Hb_011849_020--Hb_179138_010 Hb_000009_430 Hb_000009_430 Hb_011849_020--Hb_000009_430 Hb_001430_090 Hb_001430_090 Hb_003398_090--Hb_001430_090 Hb_003398_090--Hb_015978_010 Hb_003398_090--Hb_000139_500 Hb_000393_030 Hb_000393_030 Hb_003398_090--Hb_000393_030 Hb_000751_060 Hb_000751_060 Hb_015978_010--Hb_000751_060 Hb_010334_050 Hb_010334_050 Hb_015978_010--Hb_010334_050 Hb_000318_060--Hb_000139_500 Hb_000318_060--Hb_000393_030 Hb_002333_010 Hb_002333_010 Hb_000318_060--Hb_002333_010 Hb_001568_010 Hb_001568_010 Hb_000318_060--Hb_001568_010 Hb_008727_030 Hb_008727_030 Hb_000318_060--Hb_008727_030 Hb_001360_060 Hb_001360_060 Hb_003177_080--Hb_001360_060 Hb_156499_010 Hb_156499_010 Hb_003177_080--Hb_156499_010 Hb_000207_340 Hb_000207_340 Hb_003177_080--Hb_000207_340 Hb_003097_200 Hb_003097_200 Hb_003177_080--Hb_003097_200 Hb_000138_080 Hb_000138_080 Hb_003177_080--Hb_000138_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0697323 4.83768 8.0082 70.2908 0.1026 0.0969372
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.127509 0.100179 0 91.1966 31.3013

CAGE analysis