Hb_123713_010

Information

Type -
Description -
Location Contig123713: 2-1034
Sequence    

Annotation

kegg
ID rcu:RCOM_1452630
description o-methyltransferase, putative (EC:2.1.1.146)
nr
ID XP_002513062.1
description o-methyltransferase, putative [Ricinus communis]
swissprot
ID Q6WUC2
description (R,S)-reticuline 7-O-methyltransferase OS=Papaver somniferum GN=PSOMT1 PE=1 SV=1
trembl
ID B9RGB0
description O-methyltransferase, putative OS=Ricinus communis GN=RCOM_1452630 PE=4 SV=1
Gene Ontology
ID GO:0008171
description ( )-reticuline 7-o-methyltransferase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_123713_010 0.0 - - o-methyltransferase, putative [Ricinus communis]
2 Hb_005353_010 0.0898002418 - - Pectinesterase-1 precursor, putative [Ricinus communis]
3 Hb_000336_010 0.0910511502 transcription factor TF Family: C3H zinc finger family protein [Populus trichocarpa]
4 Hb_164853_010 0.0972022976 - - Patatin precursor, putative [Ricinus communis]
5 Hb_004724_280 0.0985952849 - - conserved hypothetical protein [Ricinus communis]
6 Hb_105377_010 0.1004894663 - - hypothetical protein PRUPE_ppa001414mg [Prunus persica]
7 Hb_007317_050 0.1013230102 - - hypothetical protein POPTR_0009s16550g [Populus trichocarpa]
8 Hb_003055_160 0.1013904985 - - PREDICTED: S-linalool synthase isoform X1 [Jatropha curcas]
9 Hb_000792_100 0.1049779452 - - PREDICTED: uncharacterized protein OsI_027940-like [Jatropha curcas]
10 Hb_005666_010 0.1081146527 - - PREDICTED: uncharacterized protein LOC105643999 [Jatropha curcas]
11 Hb_003420_010 0.111202304 - - zinc finger protein, putative [Ricinus communis]
12 Hb_000175_080 0.1142486471 - - hypothetical protein JCGZ_06123 [Jatropha curcas]
13 Hb_003185_040 0.1157266989 - - PREDICTED: 3-ketoacyl-CoA synthase 11-like [Populus euphratica]
14 Hb_012675_010 0.1182844984 - - zinc finger protein, putative [Ricinus communis]
15 Hb_002078_070 0.1268732892 - - conserved hypothetical protein [Ricinus communis]
16 Hb_001123_330 0.1289850257 - - PREDICTED: serine carboxypeptidase-like 45 [Jatropha curcas]
17 Hb_000109_200 0.1333214158 - - hypothetical protein CISIN_1g037825mg [Citrus sinensis]
18 Hb_004880_040 0.1358590939 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 isoform X1 [Jatropha curcas]
19 Hb_003598_020 0.1362542205 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 12 [Jatropha curcas]
20 Hb_007474_010 0.1379707599 - - vacuolar invertase [Manihot esculenta]

Gene co-expression network

sample Hb_123713_010 Hb_123713_010 Hb_005353_010 Hb_005353_010 Hb_123713_010--Hb_005353_010 Hb_000336_010 Hb_000336_010 Hb_123713_010--Hb_000336_010 Hb_164853_010 Hb_164853_010 Hb_123713_010--Hb_164853_010 Hb_004724_280 Hb_004724_280 Hb_123713_010--Hb_004724_280 Hb_105377_010 Hb_105377_010 Hb_123713_010--Hb_105377_010 Hb_007317_050 Hb_007317_050 Hb_123713_010--Hb_007317_050 Hb_005353_010--Hb_007317_050 Hb_031012_030 Hb_031012_030 Hb_005353_010--Hb_031012_030 Hb_000109_200 Hb_000109_200 Hb_005353_010--Hb_000109_200 Hb_000792_100 Hb_000792_100 Hb_005353_010--Hb_000792_100 Hb_004313_010 Hb_004313_010 Hb_005353_010--Hb_004313_010 Hb_000175_080 Hb_000175_080 Hb_000336_010--Hb_000175_080 Hb_000336_010--Hb_004724_280 Hb_001123_330 Hb_001123_330 Hb_000336_010--Hb_001123_330 Hb_003420_010 Hb_003420_010 Hb_000336_010--Hb_003420_010 Hb_003185_040 Hb_003185_040 Hb_000336_010--Hb_003185_040 Hb_000336_010--Hb_105377_010 Hb_012675_010 Hb_012675_010 Hb_164853_010--Hb_012675_010 Hb_164853_010--Hb_003420_010 Hb_000141_050 Hb_000141_050 Hb_164853_010--Hb_000141_050 Hb_013394_110 Hb_013394_110 Hb_164853_010--Hb_013394_110 Hb_005666_010 Hb_005666_010 Hb_164853_010--Hb_005666_010 Hb_164853_010--Hb_000336_010 Hb_004724_280--Hb_001123_330 Hb_004724_280--Hb_000175_080 Hb_004724_280--Hb_003420_010 Hb_007474_010 Hb_007474_010 Hb_004724_280--Hb_007474_010 Hb_002078_070 Hb_002078_070 Hb_004724_280--Hb_002078_070 Hb_003598_020 Hb_003598_020 Hb_105377_010--Hb_003598_020 Hb_004880_040 Hb_004880_040 Hb_105377_010--Hb_004880_040 Hb_105377_010--Hb_003185_040 Hb_105377_010--Hb_004724_280 Hb_005731_040 Hb_005731_040 Hb_105377_010--Hb_005731_040 Hb_007317_050--Hb_000109_200 Hb_000020_170 Hb_000020_170 Hb_007317_050--Hb_000020_170 Hb_016734_110 Hb_016734_110 Hb_007317_050--Hb_016734_110 Hb_000666_040 Hb_000666_040 Hb_007317_050--Hb_000666_040 Hb_007317_050--Hb_031012_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 4.55674 7.02861 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0808935 0 0.539172

CAGE analysis