Hb_000792_100

Information

Type -
Description -
Location Contig792: 147768-148226
Sequence    

Annotation

kegg
ID vvi:100257397
description uncharacterized protein OsI_027940-like
nr
ID XP_012068763.1
description PREDICTED: uncharacterized protein OsI_027940-like [Jatropha curcas]
swissprot
ID P0C8Z0
description Uncharacterized protein OsI_027940 OS=Oryza sativa subsp. indica GN=OsI_027940 PE=1 SV=2
trembl
ID B9SHW3
description HSP90 co-chaperone, putative OS=Ricinus communis GN=RCOM_0622500 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 052_J12.ab1: 147717-148400

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000792_100 0.0 - - PREDICTED: uncharacterized protein OsI_027940-like [Jatropha curcas]
2 Hb_005353_010 0.0763737981 - - Pectinesterase-1 precursor, putative [Ricinus communis]
3 Hb_007317_050 0.0947843986 - - hypothetical protein POPTR_0009s16550g [Populus trichocarpa]
4 Hb_123713_010 0.1049779452 - - o-methyltransferase, putative [Ricinus communis]
5 Hb_031012_030 0.1075640491 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein ZAT5-like [Populus euphratica]
6 Hb_000109_200 0.1112034236 - - hypothetical protein CISIN_1g037825mg [Citrus sinensis]
7 Hb_003185_040 0.119078174 - - PREDICTED: 3-ketoacyl-CoA synthase 11-like [Populus euphratica]
8 Hb_004313_010 0.1212809879 - - PREDICTED: patatin-like protein 1 [Prunus mume]
9 Hb_105377_010 0.1213496509 - - hypothetical protein PRUPE_ppa001414mg [Prunus persica]
10 Hb_000336_010 0.1279323221 transcription factor TF Family: C3H zinc finger family protein [Populus trichocarpa]
11 Hb_002078_070 0.1281768565 - - conserved hypothetical protein [Ricinus communis]
12 Hb_005666_010 0.1291330228 - - PREDICTED: uncharacterized protein LOC105643999 [Jatropha curcas]
13 Hb_004880_040 0.1321031963 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 isoform X1 [Jatropha curcas]
14 Hb_003085_070 0.1337942597 - - PREDICTED: BURP domain-containing protein 17-like isoform X2 [Jatropha curcas]
15 Hb_000666_040 0.1357039426 - - PREDICTED: MLP-like protein 34 [Vitis vinifera]
16 Hb_004724_280 0.1381799701 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000020_170 0.140391445 - - PREDICTED: aspartic proteinase PCS1 [Jatropha curcas]
18 Hb_007477_010 0.141514301 - - PREDICTED: probable indole-3-pyruvate monooxygenase YUCCA9 [Phoenix dactylifera]
19 Hb_001856_210 0.1418504635 - - PREDICTED: uncharacterized protein LOC105644171 [Jatropha curcas]
20 Hb_000445_260 0.1419135449 - - PREDICTED: uncharacterized protein LOC105127729 [Populus euphratica]

Gene co-expression network

sample Hb_000792_100 Hb_000792_100 Hb_005353_010 Hb_005353_010 Hb_000792_100--Hb_005353_010 Hb_007317_050 Hb_007317_050 Hb_000792_100--Hb_007317_050 Hb_123713_010 Hb_123713_010 Hb_000792_100--Hb_123713_010 Hb_031012_030 Hb_031012_030 Hb_000792_100--Hb_031012_030 Hb_000109_200 Hb_000109_200 Hb_000792_100--Hb_000109_200 Hb_003185_040 Hb_003185_040 Hb_000792_100--Hb_003185_040 Hb_005353_010--Hb_007317_050 Hb_005353_010--Hb_031012_030 Hb_005353_010--Hb_000109_200 Hb_004313_010 Hb_004313_010 Hb_005353_010--Hb_004313_010 Hb_005353_010--Hb_123713_010 Hb_007317_050--Hb_000109_200 Hb_000020_170 Hb_000020_170 Hb_007317_050--Hb_000020_170 Hb_016734_110 Hb_016734_110 Hb_007317_050--Hb_016734_110 Hb_000666_040 Hb_000666_040 Hb_007317_050--Hb_000666_040 Hb_007317_050--Hb_031012_030 Hb_000336_010 Hb_000336_010 Hb_123713_010--Hb_000336_010 Hb_164853_010 Hb_164853_010 Hb_123713_010--Hb_164853_010 Hb_004724_280 Hb_004724_280 Hb_123713_010--Hb_004724_280 Hb_105377_010 Hb_105377_010 Hb_123713_010--Hb_105377_010 Hb_123713_010--Hb_007317_050 Hb_031012_030--Hb_004313_010 Hb_186458_010 Hb_186458_010 Hb_031012_030--Hb_186458_010 Hb_031012_030--Hb_000109_200 Hb_017110_030 Hb_017110_030 Hb_031012_030--Hb_017110_030 Hb_000676_360 Hb_000676_360 Hb_031012_030--Hb_000676_360 Hb_000109_200--Hb_000020_170 Hb_004686_040 Hb_004686_040 Hb_000109_200--Hb_004686_040 Hb_000134_190 Hb_000134_190 Hb_000109_200--Hb_000134_190 Hb_004880_040 Hb_004880_040 Hb_003185_040--Hb_004880_040 Hb_000059_190 Hb_000059_190 Hb_003185_040--Hb_000059_190 Hb_003085_070 Hb_003085_070 Hb_003185_040--Hb_003085_070 Hb_001123_330 Hb_001123_330 Hb_003185_040--Hb_001123_330 Hb_003185_040--Hb_000336_010 Hb_003185_040--Hb_105377_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.19778 0 44.8161 66.7035 0.771826 0.28374
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0510958 8.47554

CAGE analysis