Hb_186458_010

Information

Type desease resistance
Description Gene Name: AAA_29
Location Contig186458: 1441-1755
Sequence    

Annotation

kegg
ID pxb:103953191
description ABC transporter G family member 15-like
nr
ID XP_011033347.1
description PREDICTED: ABC transporter G family member 15-like [Populus euphratica]
swissprot
ID Q9C8J8
description ABC transporter G family member 13 OS=Arabidopsis thaliana GN=ABCG13 PE=2 SV=1
trembl
ID A0A067JTB4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21106 PE=3 SV=1
Gene Ontology
ID GO:0016787
description abc transporter g family member 15-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_186458_010 0.0 desease resistance Gene Name: AAA_29 PREDICTED: ABC transporter G family member 15-like [Populus euphratica]
2 Hb_017110_030 0.0349873605 - - PREDICTED: subtilisin-like protease SBT5.4 [Jatropha curcas]
3 Hb_004313_010 0.0380156252 - - PREDICTED: patatin-like protein 1 [Prunus mume]
4 Hb_083963_010 0.045804977 - - PREDICTED: probable carboxylesterase 8 [Jatropha curcas]
5 Hb_031012_030 0.0510188326 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein ZAT5-like [Populus euphratica]
6 Hb_023582_030 0.0547317539 - - WD-repeat protein, putative [Ricinus communis]
7 Hb_000742_070 0.0560798118 - - PREDICTED: monoglyceride lipase isoform X2 [Bubalus bubalis]
8 Hb_000134_190 0.0594088195 - - hypothetical protein JCGZ_16725 [Jatropha curcas]
9 Hb_000676_360 0.0821388004 - - hypothetical protein POPTR_0007s13690g [Populus trichocarpa]
10 Hb_000109_200 0.0844562843 - - hypothetical protein CISIN_1g037825mg [Citrus sinensis]
11 Hb_004686_040 0.0871610732 - - hypothetical protein POPTR_0016s05690g [Populus trichocarpa]
12 Hb_000933_030 0.1005228347 transcription factor TF Family: ERF conserved hypothetical protein [Ricinus communis]
13 Hb_000815_050 0.1019781634 - - PREDICTED: expansin-A1 [Populus euphratica]
14 Hb_005353_010 0.1071380145 - - Pectinesterase-1 precursor, putative [Ricinus communis]
15 Hb_009847_010 0.1096182445 - - PREDICTED: uncharacterized protein LOC105641219 [Jatropha curcas]
16 Hb_000020_170 0.1105181963 - - PREDICTED: aspartic proteinase PCS1 [Jatropha curcas]
17 Hb_054316_010 0.1106286718 - - PREDICTED: UPF0481 protein At3g47200-like [Jatropha curcas]
18 Hb_000107_280 0.1137473848 - - serine/threonine protein kinase, putative [Ricinus communis]
19 Hb_029883_010 0.1171936339 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]
20 Hb_031022_030 0.1172630847 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 7-like [Jatropha curcas]

Gene co-expression network

sample Hb_186458_010 Hb_186458_010 Hb_017110_030 Hb_017110_030 Hb_186458_010--Hb_017110_030 Hb_004313_010 Hb_004313_010 Hb_186458_010--Hb_004313_010 Hb_083963_010 Hb_083963_010 Hb_186458_010--Hb_083963_010 Hb_031012_030 Hb_031012_030 Hb_186458_010--Hb_031012_030 Hb_023582_030 Hb_023582_030 Hb_186458_010--Hb_023582_030 Hb_000742_070 Hb_000742_070 Hb_186458_010--Hb_000742_070 Hb_017110_030--Hb_000742_070 Hb_017110_030--Hb_083963_010 Hb_017110_030--Hb_023582_030 Hb_000134_190 Hb_000134_190 Hb_017110_030--Hb_000134_190 Hb_000933_030 Hb_000933_030 Hb_017110_030--Hb_000933_030 Hb_004313_010--Hb_031012_030 Hb_004313_010--Hb_017110_030 Hb_000676_360 Hb_000676_360 Hb_004313_010--Hb_000676_360 Hb_004313_010--Hb_083963_010 Hb_005353_010 Hb_005353_010 Hb_004313_010--Hb_005353_010 Hb_083963_010--Hb_000742_070 Hb_083963_010--Hb_023582_030 Hb_083963_010--Hb_000134_190 Hb_031012_030--Hb_005353_010 Hb_000109_200 Hb_000109_200 Hb_031012_030--Hb_000109_200 Hb_031012_030--Hb_017110_030 Hb_031012_030--Hb_000676_360 Hb_023582_030--Hb_000134_190 Hb_023582_030--Hb_000742_070 Hb_023582_030--Hb_000933_030 Hb_004686_040 Hb_004686_040 Hb_023582_030--Hb_004686_040 Hb_000742_070--Hb_000134_190 Hb_000742_070--Hb_000933_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 3.33872 4.95793 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 1.65809

CAGE analysis