Hb_116349_070

Information

Type -
Description -
Location Contig116349: 36013-38422
Sequence    

Annotation

kegg
ID rcu:RCOM_0699780
description hypothetical protein
nr
ID KDP21282.1
description hypothetical protein JCGZ_21753 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JBX4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21753 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_05049: 36815-37399
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_116349_070 0.0 - - hypothetical protein JCGZ_21753 [Jatropha curcas]
2 Hb_005588_090 0.0573700798 - - hypothetical protein CICLE_v10003480mg [Citrus clementina]
3 Hb_000089_120 0.0615912383 - - WD-repeat protein, putative [Ricinus communis]
4 Hb_004267_040 0.0657984622 - - PREDICTED: transcriptional adapter ADA2a [Jatropha curcas]
5 Hb_000120_280 0.0696865173 - - PREDICTED: protein transport protein SEC23 [Jatropha curcas]
6 Hb_000617_100 0.0715508376 - - PREDICTED: uncharacterized protein LOC105647493 [Jatropha curcas]
7 Hb_000120_430 0.0726776827 - - PREDICTED: serine/threonine-protein phosphatase 7 [Jatropha curcas]
8 Hb_000975_040 0.0743424575 - - hypothetical protein CICLE_v10028249mg [Citrus clementina]
9 Hb_000390_320 0.0749867204 transcription factor TF Family: HSF PREDICTED: heat stress transcription factor A-1b-like [Jatropha curcas]
10 Hb_002375_010 0.0766610544 - - PREDICTED: C2 and GRAM domain-containing protein At1g03370 isoform X1 [Jatropha curcas]
11 Hb_001369_130 0.0768520854 - - PREDICTED: autophagy-related protein 3 isoform X1 [Jatropha curcas]
12 Hb_000011_100 0.0778896839 - - PREDICTED: uncharacterized protein C630.12 [Jatropha curcas]
13 Hb_002681_090 0.0789104465 - - PREDICTED: golgin candidate 6 isoform X1 [Jatropha curcas]
14 Hb_001009_320 0.0806586071 - - PREDICTED: uncharacterized protein LOC105640250 [Jatropha curcas]
15 Hb_003464_080 0.0810139604 - - PREDICTED: pyruvate kinase, cytosolic isozyme-like [Jatropha curcas]
16 Hb_000928_220 0.0826976101 - - PREDICTED: protein SCAI [Jatropha curcas]
17 Hb_017700_010 0.0849638039 - - PREDICTED: probable protein S-acyltransferase 15 [Jatropha curcas]
18 Hb_000261_240 0.0850975691 - - RecName: Full=Elongation factor 1-alpha; Short=EF-1-alpha [Manihot esculenta]
19 Hb_032202_200 0.0852602255 - - ubiquitin-protein ligase, putative [Ricinus communis]
20 Hb_006688_050 0.085460224 - - PREDICTED: cytochrome c oxidase assembly protein COX15 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_116349_070 Hb_116349_070 Hb_005588_090 Hb_005588_090 Hb_116349_070--Hb_005588_090 Hb_000089_120 Hb_000089_120 Hb_116349_070--Hb_000089_120 Hb_004267_040 Hb_004267_040 Hb_116349_070--Hb_004267_040 Hb_000120_280 Hb_000120_280 Hb_116349_070--Hb_000120_280 Hb_000617_100 Hb_000617_100 Hb_116349_070--Hb_000617_100 Hb_000120_430 Hb_000120_430 Hb_116349_070--Hb_000120_430 Hb_005588_090--Hb_004267_040 Hb_005289_040 Hb_005289_040 Hb_005588_090--Hb_005289_040 Hb_004785_100 Hb_004785_100 Hb_005588_090--Hb_004785_100 Hb_005588_090--Hb_000089_120 Hb_001821_160 Hb_001821_160 Hb_005588_090--Hb_001821_160 Hb_000261_240 Hb_000261_240 Hb_000089_120--Hb_000261_240 Hb_007657_020 Hb_007657_020 Hb_000089_120--Hb_007657_020 Hb_002784_020 Hb_002784_020 Hb_000089_120--Hb_002784_020 Hb_000398_080 Hb_000398_080 Hb_000089_120--Hb_000398_080 Hb_000011_100 Hb_000011_100 Hb_004267_040--Hb_000011_100 Hb_004267_040--Hb_000120_280 Hb_000563_130 Hb_000563_130 Hb_004267_040--Hb_000563_130 Hb_004267_040--Hb_000398_080 Hb_000603_030 Hb_000603_030 Hb_004267_040--Hb_000603_030 Hb_000120_280--Hb_000011_100 Hb_000477_050 Hb_000477_050 Hb_000120_280--Hb_000477_050 Hb_183510_020 Hb_183510_020 Hb_000120_280--Hb_183510_020 Hb_001009_320 Hb_001009_320 Hb_000120_280--Hb_001009_320 Hb_002681_090 Hb_002681_090 Hb_000120_280--Hb_002681_090 Hb_007576_110 Hb_007576_110 Hb_000617_100--Hb_007576_110 Hb_003549_150 Hb_003549_150 Hb_000617_100--Hb_003549_150 Hb_014361_070 Hb_014361_070 Hb_000617_100--Hb_014361_070 Hb_000683_070 Hb_000683_070 Hb_000617_100--Hb_000683_070 Hb_001195_560 Hb_001195_560 Hb_000617_100--Hb_001195_560 Hb_001051_080 Hb_001051_080 Hb_000617_100--Hb_001051_080 Hb_004631_180 Hb_004631_180 Hb_000120_430--Hb_004631_180 Hb_000120_430--Hb_001051_080 Hb_000020_150 Hb_000020_150 Hb_000120_430--Hb_000020_150 Hb_000120_430--Hb_000617_100 Hb_033834_030 Hb_033834_030 Hb_000120_430--Hb_033834_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.59181 5.9155 6.69143 7.56373 9.38298 6.8248
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.08523 4.68533 4.78417 8.58489 4.21916

CAGE analysis