Hb_111844_010

Information

Type -
Description -
Location Contig111844: 360-1346
Sequence    

Annotation

kegg
ID rcu:RCOM_0491950
description hypothetical protein
nr
ID XP_012069798.1
description PREDICTED: uncharacterized protein LOC105632109 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KVT1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02299 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_111844_010 0.0 - - PREDICTED: uncharacterized protein LOC105632109 [Jatropha curcas]
2 Hb_000185_050 0.1165775865 - - PREDICTED: FKBP12-interacting protein of 37 kDa [Jatropha curcas]
3 Hb_002171_060 0.1203198426 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000215_090 0.1208125551 - - cytochrome b5 domain-containing family protein [Populus trichocarpa]
5 Hb_002192_010 0.1218663385 - - -
6 Hb_003992_270 0.1221296674 - - PREDICTED: uncharacterized protein LOC105634861 isoform X3 [Jatropha curcas]
7 Hb_000377_070 0.1231177495 - - PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB homolog 2 [Jatropha curcas]
8 Hb_000946_090 0.1278188557 - - PREDICTED: cyclin-C1-2-like isoform X2 [Jatropha curcas]
9 Hb_000599_260 0.1301021138 - - Vacuolar protein sorting-associated protein 2 like 3 [Glycine soja]
10 Hb_000690_190 0.1301255856 - - 40S ribosomal protein S7, putative [Ricinus communis]
11 Hb_032202_100 0.1321591959 desease resistance Gene Name: ArsA_ATPase arsenical pump-driving atpase, putative [Ricinus communis]
12 Hb_001386_110 0.1330936723 - - PREDICTED: LOW QUALITY PROTEIN: putative fasciclin-like arabinogalactan protein 20 [Populus euphratica]
13 Hb_001472_100 0.1331982441 - - ubiquitin-conjugating enzyme h, putative [Ricinus communis]
14 Hb_000562_030 0.1337576744 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000130_270 0.1340675023 - - PREDICTED: malate dehydrogenase, mitochondrial [Jatropha curcas]
16 Hb_161574_020 0.1345312183 - - PREDICTED: ubiquitin fusion degradation protein 1 homolog [Jatropha curcas]
17 Hb_000261_160 0.1347155749 - - PREDICTED: actin-related protein 2/3 complex subunit 4 isoform X2 [Jatropha curcas]
18 Hb_000116_490 0.1355450661 - - PREDICTED: WD repeat-containing protein 55 homolog [Jatropha curcas]
19 Hb_001712_070 0.1363219846 - - PREDICTED: HD domain-containing protein 2 [Jatropha curcas]
20 Hb_002553_060 0.1375566081 - - PREDICTED: electron transfer flavoprotein subunit beta, mitochondrial [Jatropha curcas]

Gene co-expression network

sample Hb_111844_010 Hb_111844_010 Hb_000185_050 Hb_000185_050 Hb_111844_010--Hb_000185_050 Hb_002171_060 Hb_002171_060 Hb_111844_010--Hb_002171_060 Hb_000215_090 Hb_000215_090 Hb_111844_010--Hb_000215_090 Hb_002192_010 Hb_002192_010 Hb_111844_010--Hb_002192_010 Hb_003992_270 Hb_003992_270 Hb_111844_010--Hb_003992_270 Hb_000377_070 Hb_000377_070 Hb_111844_010--Hb_000377_070 Hb_001472_100 Hb_001472_100 Hb_000185_050--Hb_001472_100 Hb_002946_190 Hb_002946_190 Hb_000185_050--Hb_002946_190 Hb_000731_160 Hb_000731_160 Hb_000185_050--Hb_000731_160 Hb_111036_010 Hb_111036_010 Hb_000185_050--Hb_111036_010 Hb_000690_190 Hb_000690_190 Hb_000185_050--Hb_000690_190 Hb_003942_020 Hb_003942_020 Hb_000185_050--Hb_003942_020 Hb_161574_020 Hb_161574_020 Hb_002171_060--Hb_161574_020 Hb_000261_160 Hb_000261_160 Hb_002171_060--Hb_000261_160 Hb_007878_010 Hb_007878_010 Hb_002171_060--Hb_007878_010 Hb_001931_010 Hb_001931_010 Hb_002171_060--Hb_001931_010 Hb_000390_300 Hb_000390_300 Hb_002171_060--Hb_000390_300 Hb_000005_090 Hb_000005_090 Hb_002171_060--Hb_000005_090 Hb_032202_100 Hb_032202_100 Hb_000215_090--Hb_032202_100 Hb_004357_050 Hb_004357_050 Hb_000215_090--Hb_004357_050 Hb_000130_270 Hb_000130_270 Hb_000215_090--Hb_000130_270 Hb_002471_250 Hb_002471_250 Hb_000215_090--Hb_002471_250 Hb_005288_130 Hb_005288_130 Hb_000215_090--Hb_005288_130 Hb_003207_180 Hb_003207_180 Hb_000215_090--Hb_003207_180 Hb_007423_040 Hb_007423_040 Hb_002192_010--Hb_007423_040 Hb_124953_020 Hb_124953_020 Hb_002192_010--Hb_124953_020 Hb_002078_140 Hb_002078_140 Hb_002192_010--Hb_002078_140 Hb_005773_060 Hb_005773_060 Hb_002192_010--Hb_005773_060 Hb_000610_050 Hb_000610_050 Hb_002192_010--Hb_000610_050 Hb_000172_640 Hb_000172_640 Hb_002192_010--Hb_000172_640 Hb_003992_270--Hb_000261_160 Hb_000527_060 Hb_000527_060 Hb_003992_270--Hb_000527_060 Hb_008071_020 Hb_008071_020 Hb_003992_270--Hb_008071_020 Hb_003992_270--Hb_002171_060 Hb_000457_180 Hb_000457_180 Hb_003992_270--Hb_000457_180 Hb_003992_270--Hb_001931_010 Hb_000265_240 Hb_000265_240 Hb_000377_070--Hb_000265_240 Hb_005731_050 Hb_005731_050 Hb_000377_070--Hb_005731_050 Hb_002784_080 Hb_002784_080 Hb_000377_070--Hb_002784_080 Hb_002338_060 Hb_002338_060 Hb_000377_070--Hb_002338_060 Hb_001234_080 Hb_001234_080 Hb_000377_070--Hb_001234_080 Hb_001635_180 Hb_001635_180 Hb_000377_070--Hb_001635_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
21.9184 15.5677 51.9904 56.4622 48.1272 20.2822
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
39.2703 78.4656 14.1222 27.5132 27.5793

CAGE analysis