Hb_090855_010

Information

Type -
Description -
Location Contig90855: 423-2276
Sequence    

Annotation

kegg
ID rcu:RCOM_0885080
description Disease resistance protein RPS5, putative
nr
ID XP_002522629.1
description Disease resistance protein RPS5, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9S9G0
description Disease resistance protein RPS5, putative OS=Ricinus communis GN=RCOM_0885080 PE=4 SV=1
Gene Ontology
ID GO:0000166
description disease resistance protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_090855_010 0.0 - - Disease resistance protein RPS5, putative [Ricinus communis]
2 Hb_007590_070 0.1329753566 - - PREDICTED: inositol 3-kinase [Jatropha curcas]
3 Hb_010874_020 0.1401621471 - - PREDICTED: uncharacterized protein LOC105636745 [Jatropha curcas]
4 Hb_000230_080 0.1464317966 - - PREDICTED: serine/threonine-protein kinase EDR1 [Jatropha curcas]
5 Hb_001930_010 0.146438086 - - PREDICTED: uncharacterized protein LOC105633074 [Jatropha curcas]
6 Hb_001439_140 0.1476551347 - - pattern formation protein, putative [Ricinus communis]
7 Hb_000206_250 0.1496179391 - - PREDICTED: UBP1-associated protein 2A-like [Jatropha curcas]
8 Hb_001252_180 0.1515911446 desease resistance Gene Name: DUF3542 conserved hypothetical protein [Ricinus communis]
9 Hb_000193_140 0.1517993256 - - conserved hypothetical protein [Ricinus communis]
10 Hb_002255_070 0.1529057104 - - PREDICTED: isoleucine--tRNA ligase, cytoplasmic-like [Camelina sativa]
11 Hb_000627_080 0.1543325932 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 48-like [Jatropha curcas]
12 Hb_010427_010 0.1549373956 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_06191 [Jatropha curcas]
13 Hb_000390_070 0.1563407648 - - PREDICTED: uncharacterized protein LOC105632478 isoform X1 [Jatropha curcas]
14 Hb_011311_020 0.1564648939 - - PREDICTED: myosin-11 isoform X2 [Jatropha curcas]
15 Hb_007694_050 0.1564845124 - - hypothetical protein B456_002G103400 [Gossypium raimondii]
16 Hb_000270_760 0.1568613164 - - PREDICTED: RNA-dependent RNA polymerase 2 isoform X1 [Jatropha curcas]
17 Hb_004046_020 0.1576048837 - - PREDICTED: F-box/kelch-repeat protein At5g60570-like [Jatropha curcas]
18 Hb_001584_150 0.1577151682 - - PREDICTED: putative pentatricopeptide repeat-containing protein At5g40405 [Jatropha curcas]
19 Hb_027402_140 0.1581778916 - - PREDICTED: pentatricopeptide repeat-containing protein At3g47530 [Jatropha curcas]
20 Hb_001266_060 0.1605105661 - - PREDICTED: putative pentatricopeptide repeat-containing protein At3g47840 [Jatropha curcas]

Gene co-expression network

sample Hb_090855_010 Hb_090855_010 Hb_007590_070 Hb_007590_070 Hb_090855_010--Hb_007590_070 Hb_010874_020 Hb_010874_020 Hb_090855_010--Hb_010874_020 Hb_000230_080 Hb_000230_080 Hb_090855_010--Hb_000230_080 Hb_001930_010 Hb_001930_010 Hb_090855_010--Hb_001930_010 Hb_001439_140 Hb_001439_140 Hb_090855_010--Hb_001439_140 Hb_000206_250 Hb_000206_250 Hb_090855_010--Hb_000206_250 Hb_134469_010 Hb_134469_010 Hb_007590_070--Hb_134469_010 Hb_007590_070--Hb_010874_020 Hb_000733_210 Hb_000733_210 Hb_007590_070--Hb_000733_210 Hb_000193_140 Hb_000193_140 Hb_007590_070--Hb_000193_140 Hb_010427_010 Hb_010427_010 Hb_007590_070--Hb_010427_010 Hb_168697_010 Hb_168697_010 Hb_010874_020--Hb_168697_010 Hb_006938_080 Hb_006938_080 Hb_010874_020--Hb_006938_080 Hb_002276_130 Hb_002276_130 Hb_010874_020--Hb_002276_130 Hb_000000_370 Hb_000000_370 Hb_010874_020--Hb_000000_370 Hb_012490_080 Hb_012490_080 Hb_010874_020--Hb_012490_080 Hb_001617_050 Hb_001617_050 Hb_010874_020--Hb_001617_050 Hb_010710_010 Hb_010710_010 Hb_000230_080--Hb_010710_010 Hb_000413_180 Hb_000413_180 Hb_000230_080--Hb_000413_180 Hb_000207_390 Hb_000207_390 Hb_000230_080--Hb_000207_390 Hb_002307_100 Hb_002307_100 Hb_000230_080--Hb_002307_100 Hb_000390_070 Hb_000390_070 Hb_000230_080--Hb_000390_070 Hb_003750_080 Hb_003750_080 Hb_000230_080--Hb_003750_080 Hb_001247_070 Hb_001247_070 Hb_001930_010--Hb_001247_070 Hb_001930_010--Hb_000390_070 Hb_003216_080 Hb_003216_080 Hb_001930_010--Hb_003216_080 Hb_000313_060 Hb_000313_060 Hb_001930_010--Hb_000313_060 Hb_124315_020 Hb_124315_020 Hb_001930_010--Hb_124315_020 Hb_000514_060 Hb_000514_060 Hb_001930_010--Hb_000514_060 Hb_001439_140--Hb_000313_060 Hb_007586_030 Hb_007586_030 Hb_001439_140--Hb_007586_030 Hb_001439_140--Hb_001930_010 Hb_000193_310 Hb_000193_310 Hb_001439_140--Hb_000193_310 Hb_010417_050 Hb_010417_050 Hb_001439_140--Hb_010417_050 Hb_014267_010 Hb_014267_010 Hb_001439_140--Hb_014267_010 Hb_000123_210 Hb_000123_210 Hb_000206_250--Hb_000123_210 Hb_007101_170 Hb_007101_170 Hb_000206_250--Hb_007101_170 Hb_090804_010 Hb_090804_010 Hb_000206_250--Hb_090804_010 Hb_004994_220 Hb_004994_220 Hb_000206_250--Hb_004994_220 Hb_001143_160 Hb_001143_160 Hb_000206_250--Hb_001143_160 Hb_002131_020 Hb_002131_020 Hb_000206_250--Hb_002131_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.1772 2.74042 0.35383 1.84318 3.61538 3.9117
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.59343 0.867481 6.84331 4.35907 1.65608

CAGE analysis