Hb_040359_010

Information

Type -
Description -
Location Contig40359: 59-364
Sequence    

Annotation

kegg
ID rcu:RCOM_0191120
description triacylglycerol lipase, putative
nr
ID XP_002532349.1
description triacylglycerol lipase, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9T280
description Triacylglycerol lipase, putative OS=Ricinus communis GN=RCOM_0191120 PE=4 SV=1
Gene Ontology
ID GO:0004620
description phospholipase a1- chloroplastic-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_040359_010 0.0 - - triacylglycerol lipase, putative [Ricinus communis]
2 Hb_001269_460 0.1543367352 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 40 [Jatropha curcas]
3 Hb_105226_010 0.158027757 - - PREDICTED: ammonium transporter 3 member 1-like [Jatropha curcas]
4 Hb_006018_050 0.1950465216 - - PREDICTED: probable protein phosphatase 2C 63 [Jatropha curcas]
5 Hb_003938_030 0.19770399 transcription factor TF Family: ERF ethylene-responsive transcription factor 2 [Hevea brasiliensis]
6 Hb_002675_200 0.2330536567 transcription factor TF Family: AUX/IAA Auxin-responsive protein IAA1, putative [Ricinus communis]
7 Hb_001470_070 0.243979895 - - metal ion binding protein, putative [Ricinus communis]
8 Hb_155946_030 0.2505464806 - - PREDICTED: BTB/POZ domain-containing protein At5g41330 [Jatropha curcas]
9 Hb_007145_010 0.2507976833 - - ammonium transporter 3.1-like protein [Camellia sinensis]
10 Hb_005210_030 0.2549543019 transcription factor TF Family: ERF Transcriptional factor TINY, putative [Ricinus communis]
11 Hb_128486_010 0.255764396 - - PREDICTED: U-box domain-containing protein 28 [Jatropha curcas]
12 Hb_000540_090 0.2581260876 - - PREDICTED: chitinase 2-like [Jatropha curcas]
13 Hb_119316_020 0.2588117965 - - -
14 Hb_002374_200 0.2588594131 transcription factor TF Family: NAC NAC transcription factor [Hevea brasiliensis]
15 Hb_001579_070 0.2590996531 - - PREDICTED: uncharacterized protein LOC105644596 [Jatropha curcas]
16 Hb_011972_010 0.2611780803 - - conserved hypothetical protein [Ricinus communis]
17 Hb_128524_020 0.2652078419 - - PREDICTED: aspartic proteinase-like protein 2 isoform X2 [Jatropha curcas]
18 Hb_000260_300 0.273725258 - - calcium binding protein/cast, putative [Ricinus communis]
19 Hb_002400_020 0.274437292 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Jatropha curcas]
20 Hb_000162_130 0.27533046 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_040359_010 Hb_040359_010 Hb_001269_460 Hb_001269_460 Hb_040359_010--Hb_001269_460 Hb_105226_010 Hb_105226_010 Hb_040359_010--Hb_105226_010 Hb_006018_050 Hb_006018_050 Hb_040359_010--Hb_006018_050 Hb_003938_030 Hb_003938_030 Hb_040359_010--Hb_003938_030 Hb_002675_200 Hb_002675_200 Hb_040359_010--Hb_002675_200 Hb_001470_070 Hb_001470_070 Hb_040359_010--Hb_001470_070 Hb_001269_460--Hb_006018_050 Hb_001269_460--Hb_003938_030 Hb_027445_040 Hb_027445_040 Hb_001269_460--Hb_027445_040 Hb_003633_100 Hb_003633_100 Hb_001269_460--Hb_003633_100 Hb_001269_460--Hb_105226_010 Hb_105226_010--Hb_003938_030 Hb_000540_090 Hb_000540_090 Hb_105226_010--Hb_000540_090 Hb_105226_010--Hb_001470_070 Hb_002374_200 Hb_002374_200 Hb_105226_010--Hb_002374_200 Hb_000072_190 Hb_000072_190 Hb_006018_050--Hb_000072_190 Hb_001579_070 Hb_001579_070 Hb_006018_050--Hb_001579_070 Hb_031822_010 Hb_031822_010 Hb_006018_050--Hb_031822_010 Hb_089140_110 Hb_089140_110 Hb_006018_050--Hb_089140_110 Hb_000162_130 Hb_000162_130 Hb_006018_050--Hb_000162_130 Hb_006018_050--Hb_003633_100 Hb_003938_030--Hb_000540_090 Hb_083822_010 Hb_083822_010 Hb_003938_030--Hb_083822_010 Hb_000375_230 Hb_000375_230 Hb_003938_030--Hb_000375_230 Hb_002675_200--Hb_001470_070 Hb_128524_020 Hb_128524_020 Hb_002675_200--Hb_128524_020 Hb_011618_100 Hb_011618_100 Hb_002675_200--Hb_011618_100 Hb_128486_010 Hb_128486_010 Hb_002675_200--Hb_128486_010 Hb_002675_200--Hb_089140_110 Hb_008768_020 Hb_008768_020 Hb_002675_200--Hb_008768_020 Hb_007145_010 Hb_007145_010 Hb_001470_070--Hb_007145_010 Hb_006503_010 Hb_006503_010 Hb_001470_070--Hb_006503_010 Hb_005144_190 Hb_005144_190 Hb_001470_070--Hb_005144_190 Hb_001322_030 Hb_001322_030 Hb_001470_070--Hb_001322_030 Hb_034904_010 Hb_034904_010 Hb_001470_070--Hb_034904_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.449093 53.115 63.6432 17.1872 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 31.9762 4.43269 1.16804 2.62815

CAGE analysis