Hb_023308_010

Information

Type -
Description -
Location Contig23308: 11828-13462
Sequence    

Annotation

kegg
ID mdm:103440394
description isoflavone reductase homolog
nr
ID XP_012067259.1
description PREDICTED: isoflavone reductase-like protein [Jatropha curcas]
swissprot
ID E1U332
description Isoflavone reductase-like protein OS=Olea europaea PE=1 SV=1
trembl
ID A0A067LBC0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26798 PE=4 SV=1
Gene Ontology
ID GO:0032442
description isoflavone reductase homolog

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_24488: 11992-13496
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_023308_010 0.0 - - PREDICTED: isoflavone reductase-like protein [Jatropha curcas]
2 Hb_154038_040 0.1224713495 - - nutrient reservoir, putative [Ricinus communis]
3 Hb_000457_120 0.1277403115 - - PREDICTED: death-associated protein kinase dapk-1 [Jatropha curcas]
4 Hb_004117_020 0.1333273939 - - conserved hypothetical protein [Ricinus communis]
5 Hb_001360_020 0.133578058 - - PREDICTED: S-adenosylmethionine synthase 1 [Nelumbo nucifera]
6 Hb_000928_200 0.1409677263 - - PREDICTED: RING-H2 finger protein ATL52-like [Jatropha curcas]
7 Hb_001688_030 0.1411338722 - - hypothetical protein JCGZ_10716 [Jatropha curcas]
8 Hb_002203_020 0.1420502001 - - conserved hypothetical protein [Ricinus communis]
9 Hb_003086_030 0.142953442 - - PREDICTED: fasciclin-like arabinogalactan protein 17 [Jatropha curcas]
10 Hb_006154_010 0.1435563538 - - UDP-glucose 6-dehydrogenase, putative [Ricinus communis]
11 Hb_002809_080 0.1453420453 - - conserved hypothetical protein [Ricinus communis]
12 Hb_003376_140 0.1466566379 - - PREDICTED: L-type lectin-domain containing receptor kinase VIII.1 [Jatropha curcas]
13 Hb_002384_030 0.1472970801 - - conserved hypothetical protein [Ricinus communis]
14 Hb_174541_030 0.1472992397 - - Cytochrome P450, family 98, subfamily A, polypeptide 3 [Theobroma cacao]
15 Hb_002890_110 0.1485057148 - - PREDICTED: protein NRT1/ PTR FAMILY 4.3 [Jatropha curcas]
16 Hb_003125_210 0.1495454631 - - Phospholipase C 4 precursor, putative [Ricinus communis]
17 Hb_000003_580 0.1513042248 - - conserved hypothetical protein [Ricinus communis]
18 Hb_134014_010 0.1532066641 - - PREDICTED: testis-expressed sequence 10 protein isoform X2 [Jatropha curcas]
19 Hb_000028_550 0.1533603059 - - unknown [Medicago truncatula]
20 Hb_001117_180 0.1539541641 - - PREDICTED: uncharacterized protein LOC105629703 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_023308_010 Hb_023308_010 Hb_154038_040 Hb_154038_040 Hb_023308_010--Hb_154038_040 Hb_000457_120 Hb_000457_120 Hb_023308_010--Hb_000457_120 Hb_004117_020 Hb_004117_020 Hb_023308_010--Hb_004117_020 Hb_001360_020 Hb_001360_020 Hb_023308_010--Hb_001360_020 Hb_000928_200 Hb_000928_200 Hb_023308_010--Hb_000928_200 Hb_001688_030 Hb_001688_030 Hb_023308_010--Hb_001688_030 Hb_001117_180 Hb_001117_180 Hb_154038_040--Hb_001117_180 Hb_000028_550 Hb_000028_550 Hb_154038_040--Hb_000028_550 Hb_000384_020 Hb_000384_020 Hb_154038_040--Hb_000384_020 Hb_154038_040--Hb_001688_030 Hb_004558_060 Hb_004558_060 Hb_154038_040--Hb_004558_060 Hb_002518_020 Hb_002518_020 Hb_154038_040--Hb_002518_020 Hb_000457_120--Hb_000928_200 Hb_001936_120 Hb_001936_120 Hb_000457_120--Hb_001936_120 Hb_029791_010 Hb_029791_010 Hb_000457_120--Hb_029791_010 Hb_000020_200 Hb_000020_200 Hb_000457_120--Hb_000020_200 Hb_005305_040 Hb_005305_040 Hb_000457_120--Hb_005305_040 Hb_002759_030 Hb_002759_030 Hb_000457_120--Hb_002759_030 Hb_174541_030 Hb_174541_030 Hb_004117_020--Hb_174541_030 Hb_002203_020 Hb_002203_020 Hb_004117_020--Hb_002203_020 Hb_002384_030 Hb_002384_030 Hb_004117_020--Hb_002384_030 Hb_004117_020--Hb_001360_020 Hb_004117_020--Hb_000028_550 Hb_155666_010 Hb_155666_010 Hb_004117_020--Hb_155666_010 Hb_002000_100 Hb_002000_100 Hb_001360_020--Hb_002000_100 Hb_001360_020--Hb_002384_030 Hb_142056_010 Hb_142056_010 Hb_001360_020--Hb_142056_010 Hb_002007_330 Hb_002007_330 Hb_001360_020--Hb_002007_330 Hb_000453_290 Hb_000453_290 Hb_001360_020--Hb_000453_290 Hb_008731_010 Hb_008731_010 Hb_001360_020--Hb_008731_010 Hb_000317_170 Hb_000317_170 Hb_000928_200--Hb_000317_170 Hb_000928_200--Hb_005305_040 Hb_000856_030 Hb_000856_030 Hb_000928_200--Hb_000856_030 Hb_000030_230 Hb_000030_230 Hb_000928_200--Hb_000030_230 Hb_000307_060 Hb_000307_060 Hb_000928_200--Hb_000307_060 Hb_008021_050 Hb_008021_050 Hb_001688_030--Hb_008021_050 Hb_000093_010 Hb_000093_010 Hb_001688_030--Hb_000093_010 Hb_001688_030--Hb_001360_020 Hb_001688_030--Hb_002384_030 Hb_133492_010 Hb_133492_010 Hb_001688_030--Hb_133492_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.28191 64.2669 66.6534 326.921 2.2628 5.65466
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.156961 0.185205 14.4332 42.9348 112.477

CAGE analysis