Hb_000030_230

Information

Type -
Description -
Location Contig30: 190238-192517
Sequence    

Annotation

kegg
ID rcu:RCOM_1122030
description pyruvate kinase, putative (EC:2.7.1.40)
nr
ID XP_012092694.1
description PREDICTED: pyruvate kinase, cytosolic isozyme [Jatropha curcas]
swissprot
ID Q42954
description Pyruvate kinase, cytosolic isozyme OS=Nicotiana tabacum PE=2 SV=1
trembl
ID A0A067JLA9
description Pyruvate kinase OS=Jatropha curcas GN=JCGZ_06860 PE=3 SV=1
Gene Ontology
ID GO:0000287
description pyruvate cytosolic isozyme

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_31519: 191162-191460
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000030_230 0.0 - - PREDICTED: pyruvate kinase, cytosolic isozyme [Jatropha curcas]
2 Hb_000307_060 0.0726259447 - - PREDICTED: mechanosensitive ion channel protein 8-like [Jatropha curcas]
3 Hb_003582_030 0.0837361838 - - PREDICTED: serine/threonine-protein kinase BRI1-like 2 [Jatropha curcas]
4 Hb_000317_170 0.08837006 - - PREDICTED: E3 ubiquitin-protein ligase RING1 [Jatropha curcas]
5 Hb_000087_190 0.0944248109 - - hypothetical protein CICLE_v10033278mg [Citrus clementina]
6 Hb_000000_260 0.095171058 - - PREDICTED: probable galacturonosyltransferase-like 1 [Jatropha curcas]
7 Hb_002186_110 0.103070666 - - hypothetical protein CICLE_v10024045mg, partial [Citrus clementina]
8 Hb_000197_260 0.1032517717 - - hypothetical protein PRUPE_ppa025448mg [Prunus persica]
9 Hb_000928_200 0.104420698 - - PREDICTED: RING-H2 finger protein ATL52-like [Jatropha curcas]
10 Hb_080601_010 0.1062527805 - - metallothionein 3-like protein [Hevea brasiliensis]
11 Hb_000646_040 0.1094858124 - - PREDICTED: thiamine-repressible mitochondrial transport protein THI74-like [Jatropha curcas]
12 Hb_029791_010 0.111679715 - - hypothetical protein POPTR_0014s17480g [Populus trichocarpa]
13 Hb_002186_170 0.113948151 - - hypothetical protein POPTR_0067s00200g [Populus trichocarpa]
14 Hb_000599_160 0.1151166198 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 21/22 [Jatropha curcas]
15 Hb_000098_230 0.1164683187 - - Potassium channel AKT2/3, putative [Ricinus communis]
16 Hb_001541_170 0.11721705 - - hypothetical protein JCGZ_17850 [Jatropha curcas]
17 Hb_152914_010 0.1184197932 - - PREDICTED: polcalcin Syr v 3-like [Nicotiana sylvestris]
18 Hb_007545_220 0.11846576 - - PREDICTED: uncharacterized protein LOC105632565 [Jatropha curcas]
19 Hb_005183_070 0.1188396561 - - PREDICTED: calmodulin-like protein 5 [Solanum lycopersicum]
20 Hb_103225_030 0.1192311588 transcription factor TF Family: Orphans DNA binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000030_230 Hb_000030_230 Hb_000307_060 Hb_000307_060 Hb_000030_230--Hb_000307_060 Hb_003582_030 Hb_003582_030 Hb_000030_230--Hb_003582_030 Hb_000317_170 Hb_000317_170 Hb_000030_230--Hb_000317_170 Hb_000087_190 Hb_000087_190 Hb_000030_230--Hb_000087_190 Hb_000000_260 Hb_000000_260 Hb_000030_230--Hb_000000_260 Hb_002186_110 Hb_002186_110 Hb_000030_230--Hb_002186_110 Hb_000307_060--Hb_000317_170 Hb_000599_160 Hb_000599_160 Hb_000307_060--Hb_000599_160 Hb_000928_200 Hb_000928_200 Hb_000307_060--Hb_000928_200 Hb_005183_070 Hb_005183_070 Hb_000307_060--Hb_005183_070 Hb_000307_060--Hb_000000_260 Hb_000098_230 Hb_000098_230 Hb_003582_030--Hb_000098_230 Hb_003582_030--Hb_000087_190 Hb_000646_040 Hb_000646_040 Hb_003582_030--Hb_000646_040 Hb_002186_170 Hb_002186_170 Hb_003582_030--Hb_002186_170 Hb_000197_260 Hb_000197_260 Hb_003582_030--Hb_000197_260 Hb_000317_170--Hb_000000_260 Hb_001680_050 Hb_001680_050 Hb_000317_170--Hb_001680_050 Hb_000856_030 Hb_000856_030 Hb_000317_170--Hb_000856_030 Hb_029791_010 Hb_029791_010 Hb_000317_170--Hb_029791_010 Hb_000317_170--Hb_000599_160 Hb_000087_190--Hb_000098_230 Hb_001541_170 Hb_001541_170 Hb_000087_190--Hb_001541_170 Hb_000087_190--Hb_000197_260 Hb_000137_050 Hb_000137_050 Hb_000087_190--Hb_000137_050 Hb_000000_260--Hb_029791_010 Hb_000000_260--Hb_001680_050 Hb_007579_030 Hb_007579_030 Hb_000000_260--Hb_007579_030 Hb_000983_130 Hb_000983_130 Hb_000000_260--Hb_000983_130 Hb_152914_010 Hb_152914_010 Hb_000000_260--Hb_152914_010 Hb_011381_050 Hb_011381_050 Hb_002186_110--Hb_011381_050 Hb_002186_110--Hb_000197_260 Hb_115572_010 Hb_115572_010 Hb_002186_110--Hb_115572_010 Hb_002186_110--Hb_152914_010 Hb_000172_450 Hb_000172_450 Hb_002186_110--Hb_000172_450 Hb_180980_010 Hb_180980_010 Hb_002186_110--Hb_180980_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0130244 2.09719 1.01361 8.32379 0.0626876 0.034251
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0296584 0.0933343 0.0439127 0.176857 2.1029

CAGE analysis