Hb_020967_010

Information

Type -
Description -
Location Contig20967: 3698-5551
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_020967_010 0.0 - - -
2 Hb_053519_010 0.1325177077 - - PREDICTED: probable zinc transporter protein DDB_G0282067 [Jatropha curcas]
3 Hb_000336_190 0.1475676118 - - PREDICTED: UPF0481 protein At3g47200-like [Gossypium raimondii]
4 Hb_001472_140 0.1503680423 - - PREDICTED: BTB/POZ domain-containing protein At5g41330 [Jatropha curcas]
5 Hb_000003_760 0.1530456606 transcription factor TF Family: AUX/IAA PREDICTED: auxin-responsive protein IAA26-like [Jatropha curcas]
6 Hb_003531_040 0.1547717971 transcription factor TF Family: HB homeobox protein, putative [Ricinus communis]
7 Hb_105660_010 0.1602333215 - - PREDICTED: potassium channel AKT6-like [Jatropha curcas]
8 Hb_000029_410 0.1611934824 - - AT14A, putative [Ricinus communis]
9 Hb_001329_080 0.1622369487 - - PREDICTED: probable protein phosphatase 2C 49 [Jatropha curcas]
10 Hb_002875_070 0.1649510701 - - PREDICTED: probable mitochondrial chaperone BCS1-A [Jatropha curcas]
11 Hb_004453_180 0.1669884189 - - hypothetical protein JCGZ_07188 [Jatropha curcas]
12 Hb_004631_110 0.1732609704 - - ring finger protein, putative [Ricinus communis]
13 Hb_017159_010 0.1751372082 - - -
14 Hb_005714_100 0.1753478254 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance RPP13-like protein 1 [Vitis vinifera]
15 Hb_006615_160 0.1761001425 - - PREDICTED: UDP-glycosyltransferase 89B1-like [Jatropha curcas]
16 Hb_003913_030 0.176494965 - - PREDICTED: uncharacterized protein LOC105640313 [Jatropha curcas]
17 Hb_000056_080 0.177787276 - - PREDICTED: protein kinase 2B, chloroplastic [Jatropha curcas]
18 Hb_017857_010 0.1791758229 - - -
19 Hb_001791_010 0.1803080961 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g63710 [Jatropha curcas]
20 Hb_055531_010 0.1804301431 - - PREDICTED: probable disease resistance protein At4g27220 isoform X2 [Pyrus x bretschneideri]

Gene co-expression network

sample Hb_020967_010 Hb_020967_010 Hb_053519_010 Hb_053519_010 Hb_020967_010--Hb_053519_010 Hb_000336_190 Hb_000336_190 Hb_020967_010--Hb_000336_190 Hb_001472_140 Hb_001472_140 Hb_020967_010--Hb_001472_140 Hb_000003_760 Hb_000003_760 Hb_020967_010--Hb_000003_760 Hb_003531_040 Hb_003531_040 Hb_020967_010--Hb_003531_040 Hb_105660_010 Hb_105660_010 Hb_020967_010--Hb_105660_010 Hb_056196_060 Hb_056196_060 Hb_053519_010--Hb_056196_060 Hb_001329_080 Hb_001329_080 Hb_053519_010--Hb_001329_080 Hb_004724_330 Hb_004724_330 Hb_053519_010--Hb_004724_330 Hb_001246_160 Hb_001246_160 Hb_053519_010--Hb_001246_160 Hb_006615_160 Hb_006615_160 Hb_053519_010--Hb_006615_160 Hb_178658_010 Hb_178658_010 Hb_000336_190--Hb_178658_010 Hb_000836_210 Hb_000836_210 Hb_000336_190--Hb_000836_210 Hb_000336_190--Hb_000003_760 Hb_002875_070 Hb_002875_070 Hb_000336_190--Hb_002875_070 Hb_002849_110 Hb_002849_110 Hb_000336_190--Hb_002849_110 Hb_000336_190--Hb_001472_140 Hb_001472_140--Hb_001329_080 Hb_001472_140--Hb_000836_210 Hb_004297_080 Hb_004297_080 Hb_001472_140--Hb_004297_080 Hb_008406_030 Hb_008406_030 Hb_001472_140--Hb_008406_030 Hb_001472_140--Hb_002875_070 Hb_005408_080 Hb_005408_080 Hb_001472_140--Hb_005408_080 Hb_001787_070 Hb_001787_070 Hb_000003_760--Hb_001787_070 Hb_111881_030 Hb_111881_030 Hb_000003_760--Hb_111881_030 Hb_009557_050 Hb_009557_050 Hb_000003_760--Hb_009557_050 Hb_001956_190 Hb_001956_190 Hb_000003_760--Hb_001956_190 Hb_000003_760--Hb_178658_010 Hb_003913_030 Hb_003913_030 Hb_003531_040--Hb_003913_030 Hb_006916_200 Hb_006916_200 Hb_003531_040--Hb_006916_200 Hb_005714_100 Hb_005714_100 Hb_003531_040--Hb_005714_100 Hb_011689_100 Hb_011689_100 Hb_003531_040--Hb_011689_100 Hb_003531_040--Hb_002875_070 Hb_004453_180 Hb_004453_180 Hb_105660_010--Hb_004453_180 Hb_001357_030 Hb_001357_030 Hb_105660_010--Hb_001357_030 Hb_186647_010 Hb_186647_010 Hb_105660_010--Hb_186647_010 Hb_000172_050 Hb_000172_050 Hb_105660_010--Hb_000172_050 Hb_006550_010 Hb_006550_010 Hb_105660_010--Hb_006550_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.437334 4.73069 1.66595 4.40467 0.204802 0.391543
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.334008 0.350235 0.240493 0.970177 0.178113

CAGE analysis