Hb_019282_010

Information

Type -
Description -
Location Contig19282: 2907-13608
Sequence    

Annotation

kegg
ID rcu:RCOM_1299420
description o-linked n-acetylglucosamine transferase, ogt, putative
nr
ID XP_002519386.1
description o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9S067
description O-linked n-acetylglucosamine transferase, ogt, putative OS=Ricinus communis GN=RCOM_1299420 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_019282_010 0.0 - - o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus communis]
2 Hb_058381_010 0.1541208125 - - hypothetical protein JCGZ_13280 [Jatropha curcas]
3 Hb_000200_040 0.1606699836 - - -
4 Hb_012807_080 0.1681699158 - - hypothetical protein CICLE_v10028099mg [Citrus clementina]
5 Hb_002411_130 0.1798777398 - - PREDICTED: cytosolic sulfotransferase 15-like [Populus euphratica]
6 Hb_000159_110 0.1812630263 - - PREDICTED: thioredoxin-like protein YLS8 isoform X2 [Malus domestica]
7 Hb_003376_070 0.1936533844 - - hypothetical protein B456_009G419800 [Gossypium raimondii]
8 Hb_171788_010 0.1936606362 - - hypothetical protein CISIN_1g007892mg [Citrus sinensis]
9 Hb_176117_010 0.1960000946 - - Cold-inducible RNA-binding protein [Morus notabilis]
10 Hb_001427_180 0.1961856251 - - PREDICTED: F-box/LRR-repeat protein At4g29420 [Jatropha curcas]
11 Hb_139859_010 0.1993434935 - - PREDICTED: cell division control protein 48 homolog D-like [Nicotiana sylvestris]
12 Hb_003299_090 0.2000858123 - - hypothetical protein PRUPE_ppa011647mg [Prunus persica]
13 Hb_000413_170 0.2020637149 - - PREDICTED: probable histone H2A.3 [Jatropha curcas]
14 Hb_134310_020 0.2029441341 - - PREDICTED: putative cytochrome c oxidase subunit 5C-4-like [Citrus sinensis]
15 Hb_001582_030 0.204706736 - - PREDICTED: uncharacterized protein LOC105639462 [Jatropha curcas]
16 Hb_002904_090 0.2050988856 - - PREDICTED: pentatricopeptide repeat-containing protein At1g71420-like [Vitis vinifera]
17 Hb_057490_010 0.20762455 - - PREDICTED: mannose-1-phosphate guanyltransferase alpha [Jatropha curcas]
18 Hb_001767_120 0.2077343822 - - -
19 Hb_188964_010 0.2084328694 - - maintenance of killer 16 (mak16) protein, putative [Ricinus communis]
20 Hb_083043_010 0.210585332 - - PREDICTED: ribonuclease P protein subunit p25-like protein [Jatropha curcas]

Gene co-expression network

sample Hb_019282_010 Hb_019282_010 Hb_058381_010 Hb_058381_010 Hb_019282_010--Hb_058381_010 Hb_000200_040 Hb_000200_040 Hb_019282_010--Hb_000200_040 Hb_012807_080 Hb_012807_080 Hb_019282_010--Hb_012807_080 Hb_002411_130 Hb_002411_130 Hb_019282_010--Hb_002411_130 Hb_000159_110 Hb_000159_110 Hb_019282_010--Hb_000159_110 Hb_003376_070 Hb_003376_070 Hb_019282_010--Hb_003376_070 Hb_083043_010 Hb_083043_010 Hb_058381_010--Hb_083043_010 Hb_187739_020 Hb_187739_020 Hb_058381_010--Hb_187739_020 Hb_030328_010 Hb_030328_010 Hb_058381_010--Hb_030328_010 Hb_058381_010--Hb_000159_110 Hb_173178_020 Hb_173178_020 Hb_058381_010--Hb_173178_020 Hb_015354_010 Hb_015354_010 Hb_058381_010--Hb_015354_010 Hb_000200_040--Hb_012807_080 Hb_006455_110 Hb_006455_110 Hb_000200_040--Hb_006455_110 Hb_005965_010 Hb_005965_010 Hb_000200_040--Hb_005965_010 Hb_006455_080 Hb_006455_080 Hb_000200_040--Hb_006455_080 Hb_139859_010 Hb_139859_010 Hb_000200_040--Hb_139859_010 Hb_176117_010 Hb_176117_010 Hb_000200_040--Hb_176117_010 Hb_012807_080--Hb_006455_110 Hb_001477_010 Hb_001477_010 Hb_012807_080--Hb_001477_010 Hb_006455_090 Hb_006455_090 Hb_012807_080--Hb_006455_090 Hb_002046_040 Hb_002046_040 Hb_012807_080--Hb_002046_040 Hb_003299_090 Hb_003299_090 Hb_012807_080--Hb_003299_090 Hb_003711_040 Hb_003711_040 Hb_012807_080--Hb_003711_040 Hb_002411_130--Hb_000159_110 Hb_001752_040 Hb_001752_040 Hb_002411_130--Hb_001752_040 Hb_009119_030 Hb_009119_030 Hb_002411_130--Hb_009119_030 Hb_121467_010 Hb_121467_010 Hb_002411_130--Hb_121467_010 Hb_002411_130--Hb_003376_070 Hb_001767_120 Hb_001767_120 Hb_002411_130--Hb_001767_120 Hb_000159_110--Hb_083043_010 Hb_000159_110--Hb_009119_030 Hb_000160_220 Hb_000160_220 Hb_000159_110--Hb_000160_220 Hb_000159_110--Hb_001752_040 Hb_058702_010 Hb_058702_010 Hb_000159_110--Hb_058702_010 Hb_003157_030 Hb_003157_030 Hb_003376_070--Hb_003157_030 Hb_003492_010 Hb_003492_010 Hb_003376_070--Hb_003492_010 Hb_003376_070--Hb_009119_030 Hb_002742_070 Hb_002742_070 Hb_003376_070--Hb_002742_070 Hb_130134_030 Hb_130134_030 Hb_003376_070--Hb_130134_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.39486 12.5655 1.52928 5.81221 20.6163 44.1844
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.63313 8.42033 1.22974 4.16314 0.336323

CAGE analysis