Hb_001477_010

Information

Type -
Description -
Location Contig1477: 5209-8546
Sequence    

Annotation

kegg
ID cam:101497975
description dnaJ homolog subfamily B member 4-like
nr
ID XP_004505540.1
description PREDICTED: dnaJ homolog subfamily B member 13-like [Cicer arietinum]
swissprot
ID P59910
description DnaJ homolog subfamily B member 13 OS=Homo sapiens GN=DNAJB13 PE=2 SV=1
trembl
ID M0RRL9
description Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1
Gene Ontology
ID GO:0051082
description dnaj homolog subfamily b member 13-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001477_010 0.0 - - PREDICTED: dnaJ homolog subfamily B member 13-like [Cicer arietinum]
2 Hb_000256_270 0.0968212118 - - PREDICTED: large proline-rich protein bag6-B isoform X1 [Jatropha curcas]
3 Hb_118301_010 0.1032124907 - - Endoribonuclease Dicer-1-like protein [Morus notabilis]
4 Hb_001252_170 0.1040390129 desease resistance Gene Name: Exostosin hypothetical protein PRUPE_ppa001357mg [Prunus persica]
5 Hb_002290_060 0.1044814185 - - o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus communis]
6 Hb_002955_010 0.112863763 - - PREDICTED: Werner syndrome ATP-dependent helicase homolog [Jatropha curcas]
7 Hb_012807_080 0.1161546138 - - hypothetical protein CICLE_v10028099mg [Citrus clementina]
8 Hb_005016_150 0.1187887053 - - -
9 Hb_000248_050 0.1191375123 - - PREDICTED: uncharacterized protein LOC105647198 isoform X3 [Jatropha curcas]
10 Hb_077219_010 0.1202670196 - - conserved hypothetical protein [Ricinus communis]
11 Hb_113216_010 0.1242207898 - - PREDICTED: calcium-dependent protein kinase 26-like [Jatropha curcas]
12 Hb_006901_040 0.1252993032 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000213_060 0.1268587408 - - PREDICTED: RRP12-like protein isoform X1 [Jatropha curcas]
14 Hb_000771_160 0.1274809479 - - PREDICTED: abscisic acid receptor PYL8 [Jatropha curcas]
15 Hb_000152_740 0.1276199151 - - Cisplatin resistance-associated overexpressed protein, putative [Ricinus communis]
16 Hb_000042_230 0.1285254503 - - PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD5 [Jatropha curcas]
17 Hb_002235_360 0.1291204297 - - PREDICTED: pentatricopeptide repeat-containing protein At5g39680 [Jatropha curcas]
18 Hb_033642_020 0.1301949225 - - hypothetical protein JCGZ_19094 [Jatropha curcas]
19 Hb_006455_080 0.130326286 - - PREDICTED: transcription factor GTE6-like isoform X2 [Nelumbo nucifera]
20 Hb_000186_010 0.1303683761 - - PREDICTED: EH domain-containing protein 1 [Jatropha curcas]

Gene co-expression network

sample Hb_001477_010 Hb_001477_010 Hb_000256_270 Hb_000256_270 Hb_001477_010--Hb_000256_270 Hb_118301_010 Hb_118301_010 Hb_001477_010--Hb_118301_010 Hb_001252_170 Hb_001252_170 Hb_001477_010--Hb_001252_170 Hb_002290_060 Hb_002290_060 Hb_001477_010--Hb_002290_060 Hb_002955_010 Hb_002955_010 Hb_001477_010--Hb_002955_010 Hb_012807_080 Hb_012807_080 Hb_001477_010--Hb_012807_080 Hb_000256_270--Hb_002955_010 Hb_000565_020 Hb_000565_020 Hb_000256_270--Hb_000565_020 Hb_023327_030 Hb_023327_030 Hb_000256_270--Hb_023327_030 Hb_113216_010 Hb_113216_010 Hb_000256_270--Hb_113216_010 Hb_000372_040 Hb_000372_040 Hb_000256_270--Hb_000372_040 Hb_000152_740 Hb_000152_740 Hb_118301_010--Hb_000152_740 Hb_000017_340 Hb_000017_340 Hb_118301_010--Hb_000017_340 Hb_005288_120 Hb_005288_120 Hb_118301_010--Hb_005288_120 Hb_118301_010--Hb_001252_170 Hb_000028_030 Hb_000028_030 Hb_118301_010--Hb_000028_030 Hb_000186_010 Hb_000186_010 Hb_001252_170--Hb_000186_010 Hb_077219_010 Hb_077219_010 Hb_001252_170--Hb_077219_010 Hb_001252_170--Hb_002290_060 Hb_001252_170--Hb_000152_740 Hb_000085_280 Hb_000085_280 Hb_002290_060--Hb_000085_280 Hb_035524_030 Hb_035524_030 Hb_002290_060--Hb_035524_030 Hb_002290_060--Hb_002955_010 Hb_002290_060--Hb_077219_010 Hb_024714_030 Hb_024714_030 Hb_002290_060--Hb_024714_030 Hb_000732_020 Hb_000732_020 Hb_002955_010--Hb_000732_020 Hb_009615_110 Hb_009615_110 Hb_002955_010--Hb_009615_110 Hb_002955_010--Hb_000372_040 Hb_000684_180 Hb_000684_180 Hb_002955_010--Hb_000684_180 Hb_002986_050 Hb_002986_050 Hb_002955_010--Hb_002986_050 Hb_006455_110 Hb_006455_110 Hb_012807_080--Hb_006455_110 Hb_006455_090 Hb_006455_090 Hb_012807_080--Hb_006455_090 Hb_002046_040 Hb_002046_040 Hb_012807_080--Hb_002046_040 Hb_003299_090 Hb_003299_090 Hb_012807_080--Hb_003299_090 Hb_003711_040 Hb_003711_040 Hb_012807_080--Hb_003711_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
60.3665 13.8628 2.40905 10.8079 91.5826 165.03
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
50.2351 23.7794 23.8835 21.3554 7.35362

CAGE analysis