Hb_077219_010

Information

Type -
Description -
Location Contig77219: 100-764
Sequence    

Annotation

kegg
ID rcu:RCOM_0632910
description hypothetical protein
nr
ID XP_002519690.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9S121
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0632910 PE=4 SV=1
Gene Ontology
ID GO:0031225
description metabolite transport

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_57683: 587-764
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_077219_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_000565_020 0.0989077456 - - PREDICTED: alpha-galactosidase 3 [Jatropha curcas]
3 Hb_000085_280 0.1021628266 - - PREDICTED: beta-(1,2)-xylosyltransferase [Jatropha curcas]
4 Hb_002290_060 0.1054334877 - - o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus communis]
5 Hb_001252_170 0.1076704326 desease resistance Gene Name: Exostosin hypothetical protein PRUPE_ppa001357mg [Prunus persica]
6 Hb_001477_010 0.1202670196 - - PREDICTED: dnaJ homolog subfamily B member 13-like [Cicer arietinum]
7 Hb_000856_100 0.1236813958 - - PREDICTED: protein NUCLEAR FUSION DEFECTIVE 4 [Jatropha curcas]
8 Hb_000186_010 0.1264929422 - - PREDICTED: EH domain-containing protein 1 [Jatropha curcas]
9 Hb_000248_050 0.1305125124 - - PREDICTED: uncharacterized protein LOC105647198 isoform X3 [Jatropha curcas]
10 Hb_003777_220 0.130534762 transcription factor TF Family: SET PREDICTED: protein SET DOMAIN GROUP 41 isoform X1 [Jatropha curcas]
11 Hb_000256_270 0.1331449644 - - PREDICTED: large proline-rich protein bag6-B isoform X1 [Jatropha curcas]
12 Hb_118301_010 0.1350030681 - - Endoribonuclease Dicer-1-like protein [Morus notabilis]
13 Hb_013405_130 0.1356103416 - - hypothetical protein CICLE_v10032221mg [Citrus clementina]
14 Hb_005288_120 0.1366355356 - - PREDICTED: uncharacterized protein LOC105647751 [Jatropha curcas]
15 Hb_000028_050 0.1368784713 - - aldose-1-epimerase, putative [Ricinus communis]
16 Hb_003813_100 0.1370258911 - - PREDICTED: proteasome subunit beta type-3-A [Cucumis sativus]
17 Hb_019654_070 0.1370287334 - - PREDICTED: probable alpha-amylase 2 [Jatropha curcas]
18 Hb_174865_050 0.1389496513 - - PREDICTED: neuroguidin [Jatropha curcas]
19 Hb_000684_180 0.1396800918 - - PREDICTED: importin subunit alpha-9 isoform X1 [Jatropha curcas]
20 Hb_035524_030 0.1409828325 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_077219_010 Hb_077219_010 Hb_000565_020 Hb_000565_020 Hb_077219_010--Hb_000565_020 Hb_000085_280 Hb_000085_280 Hb_077219_010--Hb_000085_280 Hb_002290_060 Hb_002290_060 Hb_077219_010--Hb_002290_060 Hb_001252_170 Hb_001252_170 Hb_077219_010--Hb_001252_170 Hb_001477_010 Hb_001477_010 Hb_077219_010--Hb_001477_010 Hb_000856_100 Hb_000856_100 Hb_077219_010--Hb_000856_100 Hb_113216_010 Hb_113216_010 Hb_000565_020--Hb_113216_010 Hb_012807_120 Hb_012807_120 Hb_000565_020--Hb_012807_120 Hb_002837_070 Hb_002837_070 Hb_000565_020--Hb_002837_070 Hb_098315_100 Hb_098315_100 Hb_000565_020--Hb_098315_100 Hb_001140_080 Hb_001140_080 Hb_000565_020--Hb_001140_080 Hb_035524_030 Hb_035524_030 Hb_000085_280--Hb_035524_030 Hb_000085_280--Hb_002290_060 Hb_013405_130 Hb_013405_130 Hb_000085_280--Hb_013405_130 Hb_005288_120 Hb_005288_120 Hb_000085_280--Hb_005288_120 Hb_019613_020 Hb_019613_020 Hb_000085_280--Hb_019613_020 Hb_000186_010 Hb_000186_010 Hb_000085_280--Hb_000186_010 Hb_002290_060--Hb_035524_030 Hb_002290_060--Hb_001477_010 Hb_002955_010 Hb_002955_010 Hb_002290_060--Hb_002955_010 Hb_024714_030 Hb_024714_030 Hb_002290_060--Hb_024714_030 Hb_118301_010 Hb_118301_010 Hb_001252_170--Hb_118301_010 Hb_001252_170--Hb_000186_010 Hb_001252_170--Hb_001477_010 Hb_001252_170--Hb_002290_060 Hb_000152_740 Hb_000152_740 Hb_001252_170--Hb_000152_740 Hb_000256_270 Hb_000256_270 Hb_001477_010--Hb_000256_270 Hb_001477_010--Hb_118301_010 Hb_001477_010--Hb_002955_010 Hb_012807_080 Hb_012807_080 Hb_001477_010--Hb_012807_080 Hb_000856_100--Hb_098315_100 Hb_009193_130 Hb_009193_130 Hb_000856_100--Hb_009193_130 Hb_002506_110 Hb_002506_110 Hb_000856_100--Hb_002506_110 Hb_019654_070 Hb_019654_070 Hb_000856_100--Hb_019654_070 Hb_005271_030 Hb_005271_030 Hb_000856_100--Hb_005271_030 Hb_000155_080 Hb_000155_080 Hb_000856_100--Hb_000155_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
595.457 31.5319 25.2694 91.3734 638.802 1080.85
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
479.465 72.89 205.51 119.037 64.1574

CAGE analysis