Hb_011609_160

Information

Type -
Description -
Location Contig11609: 166760-167785
Sequence    

Annotation

kegg
ID rcu:RCOM_1726020
description Lipase, putative
nr
ID XP_002516731.1
description Lipase, putative [Ricinus communis]
swissprot
ID Q9LFR7
description Probable carboxylesterase 17 OS=Arabidopsis thaliana GN=CXE17 PE=2 SV=1
trembl
ID B9RSL2
description Lipase, putative OS=Ricinus communis GN=RCOM_1726020 PE=4 SV=1
Gene Ontology
ID GO:0016787
description probable carboxylesterase 17

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011609_160 0.0 - - Lipase, putative [Ricinus communis]
2 Hb_002719_070 0.26337615 - - gibberellin 20-oxidase, putative [Ricinus communis]
3 Hb_135978_010 0.3134983372 - - hypothetical protein EUGRSUZ_J026621, partial [Eucalyptus grandis]
4 Hb_001623_030 0.3269875729 - - serine/threonine protein kinase, putative [Ricinus communis]
5 Hb_003142_100 0.3301349854 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Eucalyptus grandis]
6 Hb_000656_180 0.3446153468 - - PREDICTED: uncharacterized protein LOC105631371 [Jatropha curcas]
7 Hb_003861_130 0.3446345137 - - -
8 Hb_000032_190 0.3449738652 - - -
9 Hb_001776_230 0.3480458168 - - PREDICTED: uncharacterized protein LOC104884260 [Beta vulgaris subsp. vulgaris]
10 Hb_001189_060 0.3521593044 - - Auxin-induced protein 5NG4, putative [Ricinus communis]
11 Hb_000645_100 0.3544302651 - - enzyme inhibitor, putative [Ricinus communis]
12 Hb_007810_130 0.3650884011 - - PREDICTED: ankyrin-1-like [Prunus mume]
13 Hb_001860_010 0.367819655 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
14 Hb_003053_060 0.3684167243 - - PREDICTED: uncharacterized protein LOC105641515 [Jatropha curcas]
15 Hb_004102_120 0.3689922402 - - -
16 Hb_180486_010 0.3697465245 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
17 Hb_052530_030 0.3699501534 - - PREDICTED: cytochrome P450 78A9 [Jatropha curcas]
18 Hb_005588_140 0.3727743179 - - conserved hypothetical protein [Ricinus communis]
19 Hb_003095_050 0.3758133451 - - PREDICTED: transmembrane protein 45B [Jatropha curcas]
20 Hb_005588_150 0.376769232 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_011609_160 Hb_011609_160 Hb_002719_070 Hb_002719_070 Hb_011609_160--Hb_002719_070 Hb_135978_010 Hb_135978_010 Hb_011609_160--Hb_135978_010 Hb_001623_030 Hb_001623_030 Hb_011609_160--Hb_001623_030 Hb_003142_100 Hb_003142_100 Hb_011609_160--Hb_003142_100 Hb_000656_180 Hb_000656_180 Hb_011609_160--Hb_000656_180 Hb_003861_130 Hb_003861_130 Hb_011609_160--Hb_003861_130 Hb_001189_060 Hb_001189_060 Hb_002719_070--Hb_001189_060 Hb_010490_030 Hb_010490_030 Hb_002719_070--Hb_010490_030 Hb_031004_010 Hb_031004_010 Hb_002719_070--Hb_031004_010 Hb_002719_070--Hb_135978_010 Hb_004488_010 Hb_004488_010 Hb_002719_070--Hb_004488_010 Hb_135978_010--Hb_001623_030 Hb_135978_010--Hb_003861_130 Hb_004102_120 Hb_004102_120 Hb_135978_010--Hb_004102_120 Hb_062827_010 Hb_062827_010 Hb_135978_010--Hb_062827_010 Hb_011692_030 Hb_011692_030 Hb_135978_010--Hb_011692_030 Hb_020763_020 Hb_020763_020 Hb_135978_010--Hb_020763_020 Hb_001623_030--Hb_003861_130 Hb_001623_030--Hb_004102_120 Hb_001623_030--Hb_062827_010 Hb_001623_030--Hb_011692_030 Hb_001623_030--Hb_020763_020 Hb_127819_010 Hb_127819_010 Hb_003142_100--Hb_127819_010 Hb_003053_060 Hb_003053_060 Hb_003142_100--Hb_003053_060 Hb_136886_010 Hb_136886_010 Hb_003142_100--Hb_136886_010 Hb_011120_020 Hb_011120_020 Hb_003142_100--Hb_011120_020 Hb_011416_020 Hb_011416_020 Hb_003142_100--Hb_011416_020 Hb_015978_030 Hb_015978_030 Hb_003142_100--Hb_015978_030 Hb_009683_050 Hb_009683_050 Hb_000656_180--Hb_009683_050 Hb_002445_130 Hb_002445_130 Hb_000656_180--Hb_002445_130 Hb_086002_010 Hb_086002_010 Hb_000656_180--Hb_086002_010 Hb_000659_020 Hb_000659_020 Hb_000656_180--Hb_000659_020 Hb_133508_010 Hb_133508_010 Hb_000656_180--Hb_133508_010 Hb_000029_410 Hb_000029_410 Hb_000656_180--Hb_000029_410 Hb_003861_130--Hb_004102_120 Hb_003861_130--Hb_062827_010 Hb_003861_130--Hb_011692_030 Hb_003861_130--Hb_020763_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.282756 0 0.0504743 0.0215079 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0981733 0 0 0 0

CAGE analysis