Hb_062827_010

Information

Type -
Description -
Location Contig62827: 9141-9368
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_062827_010 0.0 - - -
2 Hb_011692_030 0.0494503724 - - PREDICTED: uncharacterized protein LOC105775392, partial [Gossypium raimondii]
3 Hb_020763_020 0.0504714832 - - hypothetical protein POPTR_0001s27010g [Populus trichocarpa]
4 Hb_003041_040 0.0860154082 - - PREDICTED: uncharacterized protein LOC104908276 [Beta vulgaris subsp. vulgaris]
5 Hb_004102_120 0.0948812526 - - -
6 Hb_003861_130 0.1395508614 - - -
7 Hb_001623_030 0.1767237424 - - serine/threonine protein kinase, putative [Ricinus communis]
8 Hb_135978_010 0.2103921288 - - hypothetical protein EUGRSUZ_J026621, partial [Eucalyptus grandis]
9 Hb_010490_030 0.2956859324 - - -
10 Hb_074197_060 0.3213905195 - - PREDICTED: probable protein S-acyltransferase 14 isoform X1 [Populus euphratica]
11 Hb_000889_090 0.3320356882 - - isocitrate lyase, putative [Ricinus communis]
12 Hb_000313_020 0.3328146145 - - Endoplasmic reticulum vesicle transporter protein isoform 2, partial [Theobroma cacao]
13 Hb_001205_010 0.3404795309 - - -
14 Hb_004631_120 0.3410373979 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000092_160 0.3577759573 - - PREDICTED: 18 kDa seed maturation protein [Populus euphratica]
16 Hb_032299_050 0.3599083892 - - -
17 Hb_008725_160 0.3791669509 - - conserved hypothetical protein [Ricinus communis]
18 Hb_002719_070 0.401022718 - - gibberellin 20-oxidase, putative [Ricinus communis]
19 Hb_005779_050 0.4074898845 - - hypothetical protein JCGZ_14616 [Jatropha curcas]
20 Hb_002534_110 0.4114349909 transcription factor TF Family: RWP-RK transcription factor, putative [Ricinus communis]

Gene co-expression network

sample Hb_062827_010 Hb_062827_010 Hb_011692_030 Hb_011692_030 Hb_062827_010--Hb_011692_030 Hb_020763_020 Hb_020763_020 Hb_062827_010--Hb_020763_020 Hb_003041_040 Hb_003041_040 Hb_062827_010--Hb_003041_040 Hb_004102_120 Hb_004102_120 Hb_062827_010--Hb_004102_120 Hb_003861_130 Hb_003861_130 Hb_062827_010--Hb_003861_130 Hb_001623_030 Hb_001623_030 Hb_062827_010--Hb_001623_030 Hb_011692_030--Hb_020763_020 Hb_011692_030--Hb_003041_040 Hb_011692_030--Hb_004102_120 Hb_011692_030--Hb_003861_130 Hb_011692_030--Hb_001623_030 Hb_020763_020--Hb_003041_040 Hb_020763_020--Hb_004102_120 Hb_020763_020--Hb_003861_130 Hb_020763_020--Hb_001623_030 Hb_003041_040--Hb_004102_120 Hb_003041_040--Hb_003861_130 Hb_003041_040--Hb_001623_030 Hb_004102_120--Hb_003861_130 Hb_004102_120--Hb_001623_030 Hb_135978_010 Hb_135978_010 Hb_004102_120--Hb_135978_010 Hb_003861_130--Hb_001623_030 Hb_003861_130--Hb_135978_010 Hb_001623_030--Hb_135978_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.482282 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.856525 0 0 0 0

CAGE analysis