Hb_135978_010

Information

Type -
Description -
Location Contig135978: 36-1161
Sequence    

Annotation

kegg
ID gmx:100781454
description receptor-like protein kinase-like
nr
ID KCW53423.1
description hypothetical protein EUGRSUZ_J026621, partial [Eucalyptus grandis]
swissprot
ID Q6CRA9
description Serine/threonine-protein kinase BUR1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=BUR1 PE=3 SV=1
trembl
ID A0A059AHZ0
description Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_J026621 PE=4 SV=1
Gene Ontology
ID GO:0005886
description proline-rich receptor-like protein kinase perk9

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_135978_010 0.0 - - hypothetical protein EUGRSUZ_J026621, partial [Eucalyptus grandis]
2 Hb_001623_030 0.0341086885 - - serine/threonine protein kinase, putative [Ricinus communis]
3 Hb_003861_130 0.0715701096 - - -
4 Hb_004102_120 0.1163190956 - - -
5 Hb_062827_010 0.2103921288 - - -
6 Hb_011692_030 0.258861619 - - PREDICTED: uncharacterized protein LOC105775392, partial [Gossypium raimondii]
7 Hb_020763_020 0.25985812 - - hypothetical protein POPTR_0001s27010g [Populus trichocarpa]
8 Hb_003041_040 0.2944290088 - - PREDICTED: uncharacterized protein LOC104908276 [Beta vulgaris subsp. vulgaris]
9 Hb_002719_070 0.3114729892 - - gibberellin 20-oxidase, putative [Ricinus communis]
10 Hb_011609_160 0.3134983372 - - Lipase, putative [Ricinus communis]
11 Hb_000645_100 0.3139506409 - - enzyme inhibitor, putative [Ricinus communis]
12 Hb_010490_030 0.3270022136 - - -
13 Hb_032299_050 0.3411152353 - - -
14 Hb_000889_090 0.3606251696 - - isocitrate lyase, putative [Ricinus communis]
15 Hb_007105_010 0.3619152215 - - PREDICTED: uncharacterized protein LOC103455579 [Malus domestica]
16 Hb_000836_200 0.3701517003 - - -
17 Hb_002316_040 0.3794194429 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
18 Hb_000155_100 0.3828621281 - - Protein MLO, putative [Ricinus communis]
19 Hb_001189_060 0.3964341067 - - Auxin-induced protein 5NG4, putative [Ricinus communis]
20 Hb_002411_140 0.4012168146 - - PREDICTED: cytosolic sulfotransferase 15-like [Jatropha curcas]

Gene co-expression network

sample Hb_135978_010 Hb_135978_010 Hb_001623_030 Hb_001623_030 Hb_135978_010--Hb_001623_030 Hb_003861_130 Hb_003861_130 Hb_135978_010--Hb_003861_130 Hb_004102_120 Hb_004102_120 Hb_135978_010--Hb_004102_120 Hb_062827_010 Hb_062827_010 Hb_135978_010--Hb_062827_010 Hb_011692_030 Hb_011692_030 Hb_135978_010--Hb_011692_030 Hb_020763_020 Hb_020763_020 Hb_135978_010--Hb_020763_020 Hb_001623_030--Hb_003861_130 Hb_001623_030--Hb_004102_120 Hb_001623_030--Hb_062827_010 Hb_001623_030--Hb_011692_030 Hb_001623_030--Hb_020763_020 Hb_003861_130--Hb_004102_120 Hb_003861_130--Hb_062827_010 Hb_003861_130--Hb_011692_030 Hb_003861_130--Hb_020763_020 Hb_004102_120--Hb_062827_010 Hb_004102_120--Hb_011692_030 Hb_004102_120--Hb_020763_020 Hb_062827_010--Hb_011692_030 Hb_062827_010--Hb_020763_020 Hb_003041_040 Hb_003041_040 Hb_062827_010--Hb_003041_040 Hb_011692_030--Hb_020763_020 Hb_011692_030--Hb_003041_040 Hb_020763_020--Hb_003041_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.20224 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.131196 0 0 0 0

CAGE analysis