Hb_010174_210

Information

Type -
Description -
Location Contig10174: 174055-174868
Sequence    

Annotation

kegg
ID rcu:RCOM_1082490
description heat shock protein, putative
nr
ID XP_012085581.1
description PREDICTED: small heat shock protein, chloroplastic-like isoform X1 [Jatropha curcas]
swissprot
ID P31170
description 25.3 kDa heat shock protein, chloroplastic OS=Arabidopsis thaliana GN=HSP25.3 PE=2 SV=1
trembl
ID A0A067K3C8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17893 PE=3 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_00865: 174250-174443 , PASA_asmbl_00866: 174654-175004
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010174_210 0.0 - - PREDICTED: small heat shock protein, chloroplastic-like isoform X1 [Jatropha curcas]
2 Hb_000941_140 0.2029736534 - - PREDICTED: activator of 90 kDa heat shock protein ATPase homolog 1 [Jatropha curcas]
3 Hb_020156_060 0.2081582118 - - PREDICTED: ankyrin-1-like [Prunus mume]
4 Hb_010020_010 0.2178853536 - - cytosolic class II low molecular weight heat shock protein [Prunus dulcis]
5 Hb_004296_010 0.2262736326 - - PREDICTED: activator of 90 kDa heat shock protein ATPase homolog 1 [Jatropha curcas]
6 Hb_008147_050 0.2325172383 - - PREDICTED: uncharacterized protein LOC105646845 [Jatropha curcas]
7 Hb_000062_110 0.2388418632 transcription factor TF Family: MYB hypothetical protein JCGZ_17894 [Jatropha curcas]
8 Hb_020094_020 0.2389434529 - - PREDICTED: 17.1 kDa class II heat shock protein-like [Pyrus x bretschneideri]
9 Hb_001369_370 0.2405868912 - - PREDICTED: 23.6 kDa heat shock protein, mitochondrial [Jatropha curcas]
10 Hb_008556_020 0.25038357 - - -
11 Hb_007257_010 0.2538228254 - - cytosolic class II low molecular weight heat shock protein [Prunus dulcis]
12 Hb_029508_010 0.2546310697 transcription factor TF Family: HSF DNA binding protein, putative [Ricinus communis]
13 Hb_019516_030 0.2546930958 - - Calcyclin-binding protein, putative [Ricinus communis]
14 Hb_011639_080 0.2553502038 - - PREDICTED: LOW QUALITY PROTEIN: receptor-like protein kinase FERONIA [Populus euphratica]
15 Hb_001235_100 0.2556907948 - - heat-shock protein, putative [Ricinus communis]
16 Hb_006052_030 0.2570172096 - - PREDICTED: dnaJ protein ERDJ3A [Jatropha curcas]
17 Hb_001621_160 0.2594425091 - - Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis]
18 Hb_003626_080 0.2597964713 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000421_130 0.2598763682 transcription factor TF Family: C2C2-Dof zinc finger protein, putative [Ricinus communis]
20 Hb_006629_020 0.2612590662 - - ferric reductase oxidase [Manihot esculenta]

Gene co-expression network

sample Hb_010174_210 Hb_010174_210 Hb_000941_140 Hb_000941_140 Hb_010174_210--Hb_000941_140 Hb_020156_060 Hb_020156_060 Hb_010174_210--Hb_020156_060 Hb_010020_010 Hb_010020_010 Hb_010174_210--Hb_010020_010 Hb_004296_010 Hb_004296_010 Hb_010174_210--Hb_004296_010 Hb_008147_050 Hb_008147_050 Hb_010174_210--Hb_008147_050 Hb_000062_110 Hb_000062_110 Hb_010174_210--Hb_000062_110 Hb_000941_140--Hb_004296_010 Hb_006618_040 Hb_006618_040 Hb_000941_140--Hb_006618_040 Hb_000941_140--Hb_000062_110 Hb_019516_030 Hb_019516_030 Hb_000941_140--Hb_019516_030 Hb_000454_190 Hb_000454_190 Hb_000941_140--Hb_000454_190 Hb_001232_100 Hb_001232_100 Hb_000941_140--Hb_001232_100 Hb_000205_150 Hb_000205_150 Hb_020156_060--Hb_000205_150 Hb_168893_010 Hb_168893_010 Hb_020156_060--Hb_168893_010 Hb_001621_160 Hb_001621_160 Hb_020156_060--Hb_001621_160 Hb_029980_010 Hb_029980_010 Hb_020156_060--Hb_029980_010 Hb_011639_080 Hb_011639_080 Hb_020156_060--Hb_011639_080 Hb_020094_020 Hb_020094_020 Hb_010020_010--Hb_020094_020 Hb_010020_010--Hb_000062_110 Hb_010020_010--Hb_004296_010 Hb_001369_370 Hb_001369_370 Hb_010020_010--Hb_001369_370 Hb_010407_190 Hb_010407_190 Hb_010020_010--Hb_010407_190 Hb_004296_010--Hb_006618_040 Hb_000260_370 Hb_000260_370 Hb_004296_010--Hb_000260_370 Hb_001269_310 Hb_001269_310 Hb_004296_010--Hb_001269_310 Hb_002999_060 Hb_002999_060 Hb_004296_010--Hb_002999_060 Hb_013394_060 Hb_013394_060 Hb_004296_010--Hb_013394_060 Hb_011164_010 Hb_011164_010 Hb_008147_050--Hb_011164_010 Hb_027380_230 Hb_027380_230 Hb_008147_050--Hb_027380_230 Hb_000062_030 Hb_000062_030 Hb_008147_050--Hb_000062_030 Hb_000505_110 Hb_000505_110 Hb_008147_050--Hb_000505_110 Hb_000206_120 Hb_000206_120 Hb_008147_050--Hb_000206_120 Hb_004884_030 Hb_004884_030 Hb_008147_050--Hb_004884_030 Hb_001766_040 Hb_001766_040 Hb_000062_110--Hb_001766_040 Hb_000062_110--Hb_006618_040 Hb_000062_110--Hb_001369_370 Hb_011344_020 Hb_011344_020 Hb_000062_110--Hb_011344_020 Hb_000062_110--Hb_019516_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.88171 39.1552 15.2638 41.112 161.678 29.8314
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.63625 6.81234 4.35685 1.80411 87.6764

CAGE analysis