Hb_029980_010

Information

Type -
Description -
Location Contig29980: 191-664
Sequence    

Annotation

kegg
ID rcu:RCOM_0731960
description heat-shock protein, putative
nr
ID XP_012068597.1
description PREDICTED: 17.3 kDa class I heat shock protein-like [Jatropha curcas]
swissprot
ID P04793
description 17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-M PE=3 SV=1
trembl
ID A0A067L124
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02891 PE=3 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_029980_010 0.0 - - PREDICTED: 17.3 kDa class I heat shock protein-like [Jatropha curcas]
2 Hb_005730_100 0.1579480864 - - PREDICTED: 18.2 kDa class I heat shock protein-like [Gossypium raimondii]
3 Hb_002890_190 0.2068787566 - - PREDICTED: 22.0 kDa class IV heat shock protein-like [Jatropha curcas]
4 Hb_000891_080 0.2166503544 - - PREDICTED: TMV resistance protein N-like, partial [Populus euphratica]
5 Hb_000046_220 0.2196715066 - - -
6 Hb_168893_010 0.2236005564 - - PREDICTED: 17.3 kDa class I heat shock protein-like [Nelumbo nucifera]
7 Hb_000488_030 0.2309287111 - - PREDICTED: 17.3 kDa class I heat shock protein-like [Jatropha curcas]
8 Hb_029508_010 0.2467671007 transcription factor TF Family: HSF DNA binding protein, putative [Ricinus communis]
9 Hb_020156_060 0.2600758723 - - PREDICTED: ankyrin-1-like [Prunus mume]
10 Hb_000796_060 0.2663299256 - - Glycogenin-2 [Aegilops tauschii]
11 Hb_048207_010 0.2888870896 - - heat-shock protein, putative [Ricinus communis]
12 Hb_010555_020 0.2912459496 - - hypothetical protein JCGZ_06771 [Jatropha curcas]
13 Hb_000345_120 0.2990604624 - - PREDICTED: mediator of RNA polymerase II transcription subunit 37a [Jatropha curcas]
14 Hb_010174_210 0.3005172513 - - PREDICTED: small heat shock protein, chloroplastic-like isoform X1 [Jatropha curcas]
15 Hb_004970_040 0.3089607113 - - PREDICTED: subtilisin-like protease SBT1.7 [Jatropha curcas]
16 Hb_125948_020 0.3109709695 - - phosphoinositide 5-phosphatase, putative [Ricinus communis]
17 Hb_000398_130 0.3114883355 - - PREDICTED: 22.0 kDa class IV heat shock protein-like [Jatropha curcas]
18 Hb_001104_040 0.3122014871 - - PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]
19 Hb_092043_020 0.3145955669 - - PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]
20 Hb_046198_020 0.316473269 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_029980_010 Hb_029980_010 Hb_005730_100 Hb_005730_100 Hb_029980_010--Hb_005730_100 Hb_002890_190 Hb_002890_190 Hb_029980_010--Hb_002890_190 Hb_000891_080 Hb_000891_080 Hb_029980_010--Hb_000891_080 Hb_000046_220 Hb_000046_220 Hb_029980_010--Hb_000046_220 Hb_168893_010 Hb_168893_010 Hb_029980_010--Hb_168893_010 Hb_000488_030 Hb_000488_030 Hb_029980_010--Hb_000488_030 Hb_005730_100--Hb_002890_190 Hb_005730_100--Hb_000891_080 Hb_005730_100--Hb_000488_030 Hb_001104_040 Hb_001104_040 Hb_005730_100--Hb_001104_040 Hb_000398_130 Hb_000398_130 Hb_005730_100--Hb_000398_130 Hb_002890_190--Hb_000891_080 Hb_116436_010 Hb_116436_010 Hb_002890_190--Hb_116436_010 Hb_007382_020 Hb_007382_020 Hb_002890_190--Hb_007382_020 Hb_000107_130 Hb_000107_130 Hb_002890_190--Hb_000107_130 Hb_000891_080--Hb_116436_010 Hb_000891_080--Hb_001104_040 Hb_092043_020 Hb_092043_020 Hb_000891_080--Hb_092043_020 Hb_000046_220--Hb_000488_030 Hb_079297_010 Hb_079297_010 Hb_000046_220--Hb_079297_010 Hb_000046_220--Hb_005730_100 Hb_000046_220--Hb_000891_080 Hb_002843_220 Hb_002843_220 Hb_000046_220--Hb_002843_220 Hb_046198_020 Hb_046198_020 Hb_168893_010--Hb_046198_020 Hb_000796_060 Hb_000796_060 Hb_168893_010--Hb_000796_060 Hb_168893_010--Hb_005730_100 Hb_020156_060 Hb_020156_060 Hb_168893_010--Hb_020156_060 Hb_085375_010 Hb_085375_010 Hb_168893_010--Hb_085375_010 Hb_006745_020 Hb_006745_020 Hb_000488_030--Hb_006745_020 Hb_000488_030--Hb_079297_010 Hb_000488_030--Hb_000398_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.08005 81.701 25.6914 19.2533 408.09 20.4684
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.146731 0.230525 0.579085 1.05987 51.0723

CAGE analysis