Hb_001104_040

Information

Type -
Description -
Location Contig1104: 48858-49307
Sequence    

Annotation

kegg
ID cic:CICLE_v10013017mg
description hypothetical protein
nr
ID XP_012066508.1
description PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L2Z2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23702 PE=4 SV=1
Gene Ontology
ID GO:0006979
description PREDICTED: uncharacterized protein LOC105629509

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 009_C01.ab1: 48824-49516

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001104_040 0.0 - - PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]
2 Hb_001279_230 0.1527172361 - - PREDICTED: class I heat shock protein-like [Jatropha curcas]
3 Hb_004529_020 0.1677736695 - - PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]
4 Hb_116436_010 0.1831210613 - - PREDICTED: uncharacterized protein LOC105766967 [Gossypium raimondii]
5 Hb_003647_120 0.1850915494 - - 18.2 kDa class I heat shock family protein [Populus trichocarpa]
6 Hb_092043_020 0.195888542 - - PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]
7 Hb_048207_010 0.1960428142 - - heat-shock protein, putative [Ricinus communis]
8 Hb_005730_100 0.2022237485 - - PREDICTED: 18.2 kDa class I heat shock protein-like [Gossypium raimondii]
9 Hb_023528_010 0.2083580206 - - hypothetical protein POPTR_0013s01580g [Populus trichocarpa]
10 Hb_184326_010 0.2114357062 - - RecName: Full=Anthocyanidin 3-O-glucosyltransferase 1; AltName: Full=Flavonol 3-O-glucosyltransferase 1; AltName: Full=UDP-glucose flavonoid 3-O-glucosyltransferase 1 [Manihot esculenta]
11 Hb_000891_080 0.212326051 - - PREDICTED: TMV resistance protein N-like, partial [Populus euphratica]
12 Hb_002890_190 0.2212262132 - - PREDICTED: 22.0 kDa class IV heat shock protein-like [Jatropha curcas]
13 Hb_000796_060 0.2212422731 - - Glycogenin-2 [Aegilops tauschii]
14 Hb_007382_020 0.2272582082 - - PREDICTED: BAG family molecular chaperone regulator 6-like [Jatropha curcas]
15 Hb_025194_030 0.2344799304 - - PREDICTED: BAG family molecular chaperone regulator 6-like [Jatropha curcas]
16 Hb_000398_130 0.2356596587 - - PREDICTED: 22.0 kDa class IV heat shock protein-like [Jatropha curcas]
17 Hb_004846_180 0.2401289013 - - heat shock protein, putative [Ricinus communis]
18 Hb_001723_110 0.2474655387 - - PREDICTED: solute carrier family 25 member 44-like isoform X2 [Malus domestica]
19 Hb_003337_070 0.2480206427 - - PREDICTED: probable esterase KAI2 [Jatropha curcas]
20 Hb_006745_020 0.2516354053 - - PREDICTED: 22.0 kDa class IV heat shock protein [Jatropha curcas]

Gene co-expression network

sample Hb_001104_040 Hb_001104_040 Hb_001279_230 Hb_001279_230 Hb_001104_040--Hb_001279_230 Hb_004529_020 Hb_004529_020 Hb_001104_040--Hb_004529_020 Hb_116436_010 Hb_116436_010 Hb_001104_040--Hb_116436_010 Hb_003647_120 Hb_003647_120 Hb_001104_040--Hb_003647_120 Hb_092043_020 Hb_092043_020 Hb_001104_040--Hb_092043_020 Hb_048207_010 Hb_048207_010 Hb_001104_040--Hb_048207_010 Hb_001279_230--Hb_003647_120 Hb_003337_070 Hb_003337_070 Hb_001279_230--Hb_003337_070 Hb_184326_010 Hb_184326_010 Hb_001279_230--Hb_184326_010 Hb_001723_110 Hb_001723_110 Hb_001279_230--Hb_001723_110 Hb_006745_020 Hb_006745_020 Hb_001279_230--Hb_006745_020 Hb_004529_020--Hb_092043_020 Hb_023528_010 Hb_023528_010 Hb_004529_020--Hb_023528_010 Hb_003793_050 Hb_003793_050 Hb_004529_020--Hb_003793_050 Hb_125948_020 Hb_125948_020 Hb_004529_020--Hb_125948_020 Hb_007943_010 Hb_007943_010 Hb_004529_020--Hb_007943_010 Hb_007127_010 Hb_007127_010 Hb_116436_010--Hb_007127_010 Hb_000107_130 Hb_000107_130 Hb_116436_010--Hb_000107_130 Hb_002890_190 Hb_002890_190 Hb_116436_010--Hb_002890_190 Hb_116436_010--Hb_092043_020 Hb_002900_060 Hb_002900_060 Hb_116436_010--Hb_002900_060 Hb_003647_120--Hb_001723_110 Hb_003647_120--Hb_184326_010 Hb_003647_120--Hb_003337_070 Hb_003647_120--Hb_006745_020 Hb_000398_130 Hb_000398_130 Hb_003647_120--Hb_000398_130 Hb_092043_020--Hb_023528_010 Hb_092043_020--Hb_003793_050 Hb_010555_020 Hb_010555_020 Hb_092043_020--Hb_010555_020 Hb_000796_060 Hb_000796_060 Hb_048207_010--Hb_000796_060 Hb_048207_010--Hb_001279_230 Hb_006634_010 Hb_006634_010 Hb_048207_010--Hb_006634_010 Hb_009189_060 Hb_009189_060 Hb_048207_010--Hb_009189_060 Hb_005730_100 Hb_005730_100 Hb_048207_010--Hb_005730_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
52.589 286.373 0.26832 1.49522 1148.45 165.958
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.126082 0.8342 0.0530238 1.37803

CAGE analysis