Hb_010555_020

Information

Type -
Description -
Location Contig10555: 10605-12920
Sequence    

Annotation

kegg
ID bvg:104907000
description ankyrin repeat-containing protein At3g12360-like
nr
ID KDP37317.1
description hypothetical protein JCGZ_06771 [Jatropha curcas]
swissprot
ID Q6AWW5
description Ankyrin repeat-containing protein At5g02620 OS=Arabidopsis thaliana GN=At5g02620 PE=1 SV=1
trembl
ID A0A067KMI2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06771 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010555_020 0.0 - - hypothetical protein JCGZ_06771 [Jatropha curcas]
2 Hb_000060_110 0.1825193375 - - PREDICTED: uncharacterized protein LOC105649714 [Jatropha curcas]
3 Hb_003793_050 0.1966723737 - - PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]
4 Hb_000107_130 0.1988076945 - - multicopper oxidase, putative [Ricinus communis]
5 Hb_092043_020 0.2215573309 - - PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]
6 Hb_023528_010 0.2513278979 - - hypothetical protein POPTR_0013s01580g [Populus trichocarpa]
7 Hb_004529_020 0.2571238652 - - PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]
8 Hb_116436_010 0.2579165846 - - PREDICTED: uncharacterized protein LOC105766967 [Gossypium raimondii]
9 Hb_048207_010 0.2696189122 - - heat-shock protein, putative [Ricinus communis]
10 Hb_007943_010 0.2745005966 - - -
11 Hb_000891_080 0.2899175807 - - PREDICTED: TMV resistance protein N-like, partial [Populus euphratica]
12 Hb_029980_010 0.2912459496 - - PREDICTED: 17.3 kDa class I heat shock protein-like [Jatropha curcas]
13 Hb_002890_190 0.2939360275 - - PREDICTED: 22.0 kDa class IV heat shock protein-like [Jatropha curcas]
14 Hb_000005_120 0.2950976034 transcription factor TF Family: C2H2 PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1 [Jatropha curcas]
15 Hb_000011_130 0.2950976034 - - lipase [Ricinus communis]
16 Hb_000046_140 0.2950976034 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000081_070 0.2950976034 - - -
18 Hb_000171_010 0.2950976034 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
19 Hb_000189_040 0.2950976034 - - hypothetical protein [Trichoderma aureoviride]
20 Hb_000210_170 0.2950976034 - - -

Gene co-expression network

sample Hb_010555_020 Hb_010555_020 Hb_000060_110 Hb_000060_110 Hb_010555_020--Hb_000060_110 Hb_003793_050 Hb_003793_050 Hb_010555_020--Hb_003793_050 Hb_000107_130 Hb_000107_130 Hb_010555_020--Hb_000107_130 Hb_092043_020 Hb_092043_020 Hb_010555_020--Hb_092043_020 Hb_023528_010 Hb_023528_010 Hb_010555_020--Hb_023528_010 Hb_004529_020 Hb_004529_020 Hb_010555_020--Hb_004529_020 Hb_000060_110--Hb_000107_130 Hb_000005_120 Hb_000005_120 Hb_000060_110--Hb_000005_120 Hb_000011_130 Hb_000011_130 Hb_000060_110--Hb_000011_130 Hb_000046_140 Hb_000046_140 Hb_000060_110--Hb_000046_140 Hb_000081_070 Hb_000081_070 Hb_000060_110--Hb_000081_070 Hb_000171_010 Hb_000171_010 Hb_000060_110--Hb_000171_010 Hb_007943_010 Hb_007943_010 Hb_003793_050--Hb_007943_010 Hb_003793_050--Hb_023528_010 Hb_003793_050--Hb_092043_020 Hb_003793_050--Hb_004529_020 Hb_003392_010 Hb_003392_010 Hb_003793_050--Hb_003392_010 Hb_049827_010 Hb_049827_010 Hb_003793_050--Hb_049827_010 Hb_116436_010 Hb_116436_010 Hb_000107_130--Hb_116436_010 Hb_000107_130--Hb_000005_120 Hb_000107_130--Hb_000011_130 Hb_000107_130--Hb_000046_140 Hb_000107_130--Hb_000081_070 Hb_092043_020--Hb_004529_020 Hb_092043_020--Hb_023528_010 Hb_092043_020--Hb_116436_010 Hb_001104_040 Hb_001104_040 Hb_092043_020--Hb_001104_040 Hb_023528_010--Hb_004529_020 Hb_023528_010--Hb_007943_010 Hb_125948_020 Hb_125948_020 Hb_023528_010--Hb_125948_020 Hb_023528_010--Hb_001104_040 Hb_004529_020--Hb_001104_040 Hb_004529_020--Hb_125948_020 Hb_004529_020--Hb_007943_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0402071 0.0150147 0 0.282251 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis